2024
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Aleksandrova Yulia I. Antibacterial Activity of Various Morphologies of Films Based on Guanidine Derivatives of Pillar[5]arene: Influence of the Nature of One Substitute on Self-assembly / Yulia I. Aleksandrova, Dmitriy N. Shurpik, Viktoriya A. Nazmutdinova, Pavel V. Zelenikhin, Evgeniya V. Subakaeva, Evgeniya A. Sokolova, Yulia O. Leonteva, Anna V. Mironova, Airat R. Kayumov, Vladislav S. Petrovskii, Igor I. Potemkin*, and Ivan I. Stoikov // ACS Appl. Mater. Interfaces - 2024 - С.1-19.
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Khaliullina A, Kolesnikova A, Khairullina L, The Antimicrobial Potential of the Hop (Humulus lupulus L.) Extract against Staphylococcus aureus and Oral Streptococci//Pharmaceuticals. - 2024. - Vol.17, Is.2. - Art. №162.
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Khaliullina, A.; Kolesnikova, A.; Khairullina, L.; Morgatskaya, O.; Shakirova, D.; Patov, S.; Nekrasova, P.; Bogachev, M.; Kurkin, V.; Trizna, E.; et al. The Antimicrobial Potential of the Hop (Humulus lupulus L.) Extract against Staphylococcus aureus and Oral Streptococci. Pharmaceuticals 2024, 17, 162. https://doi.org/10.3390/ph17020162
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Mironova A.V, Fedorova M.S, Zakarova N.D, Effect of Cell-Free Culture Fluid of Staphylococcus aureus on the Structure and Biochemical Composition of Klebsiella pneumoniae and Pseudomonas aeruginosa Biofilms//Microbiology (Russian Federation). - 2024. - Vol.93, Is.3. - P.375-379.
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Mironova, A.V., Fedorova, M.S., Zakarova, N.D., Salikhova A. R., Trizna E. Y., Kayumov A. R. Effect of Cell-Free Culture Fluid of Staphylococcus aureus on the Structure and Biochemical Composition of Klebsiella pneumoniae and Pseudomonas aeruginosa Biofilms / A. V. Mironova, M. S. Fedorova, N. D. Zakarova, A. R. Salikhova, E. Y. Trizna, A. R. Kayumov // Microbiology. - 2024. - V.93. - P. 375–379.
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Fedorova M.S, Gatina A.E, Ilyina V.N, A New Bacteriophage Pseudomonas Phage Ka1 from a Tributary Stream of Lake Baikal//Microbiology (Russian Federation). - 2024. - Vol.93, Is.4. - P.507-510.
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Gavrilova E.A, Karaseva O.S, Monir Y.N, The Effect of Probiotic Lactobacilli on the Morphological and Physiological Parameters and Intestinal Microbiota of Quails//Microbiology (Russian Federation). - 2024. - Vol.93, Is.4. - P.516-520.
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Gavrilova E, Ezhkov V, Ezhkova A, The liquid mineral-and probiotic-containing feed additives for poultry//BIO Web of Conferences. - 2024. - Vol.121, Is.. - Art. №04013.
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Fedorova M.S, Mutallapova G.I, Aznabayeva Z.A, Bacteriophages from waters of the Volga region//Limnology and Freshwater Biology. - 2024. - Vol.2024, Is.4. - P.881-887.
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2023
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Sulaiman, R. Antimicrobial and biofilm-preventing activity of l-borneol possessing 2(5H)-furanone derivative F131 against S. aureus – C. albicans mixed cultures / R. Sulaiman, E. Trizna, A. Kolesnikova, A. Khabibrakhmanova, A. Kurbangalieva, M. Bogachev, A. Kayumov // Pathogens. – 2023. – V. 12, № 1. – Art. № 26.
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Sinitca, A. M., Lyanova, A. I., Kaplun, D. I., Zelenikhin, P. V., Imaev, R. G., Gafurov, A. M., Usmanov, B. M., Tishin, D. V., Kayumov, A. R., Bogachev, M. I. Multi-class segmentation of heterogeneous areas in biomedical and environmental images based on the assessment of local edge density, Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLVIII-2/W3-2023, 233–238, https://doi.org/10.5194/isprs-archives-XLVIII-2-W3-2023-233-2023, 2023.
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Gilfanov I.R, Pavelyev R.S, Nikitina L.E, N-(((1S,5R)-6,6-Dimethylbicyclo[3.1.1]hept-2-en-2-yl)methyl)-3-((1R,5S)-6,6-dimethylbicyclo[3.1.1]hept-2-ene/ane-2-carboxamido)-N,N-dimethylpropan-1-aminium Bromide//MolBank. - 2023. - Vol.2023, Is.1. - Art. №M1592.
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Trizna, E.Y. Brightfield vs Fluorescent Staining Dataset–A Test Bed Image Set for Machine Learning based Virtual Staining / E.Y. Trizna, A.M. Sinitca, A.I. Lyanova, D.R. Baidamshina, P.V. Zelenikhin, D.I. Kaplun, A.R. Kayumov, M.I. Bogachev // Scientific Data. - 2023. - V. 10(1). - P.160.
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Mironova, A.V. Alterations in Antibiotic Susceptibility of Staphylococcus aureus and Klebsiella pneumoniae in Dual Species Biofilms / A.V. Mironova, A.V. Karimova, M.I. Bogachev, A.R. Kayumov, E.Y. Trizna // International Journal of Molecular Sciences. – 2023. – V.24. – P. 8475.
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Guseva, G.B., Novel BODIPY Conjugates with Myrtenol: Design, Spectral Characteristics, and Possibilities for Practical Application / G.B. Guseva, E.V. Antina, M.B. Berezin, L.E. Nikitina, I.R. Gilfanov, R.S. Pavelyev, S.A. Lisovskaya, L.L. Frolova, O.V. Ostolopovskaya, I.Z. Rakhmatullin, V.V. Klochkov, E.Y. Trizna, A.R. Kayumov // Inorganics. – 2023. – V.11. – P. 241.
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Bogachev M.I., Tishin D.V., Gafurov A.M., Gareev B.I., Imaev R.G., Kaplun D.I., Markelova M.I., Pyko N.S., Pyko S.A., Romanova V.A., Safonova A.N., Sinitca A.M., Usmanov B.M., Kayumov A.R. The impact of Grey Heron (Ardea cinerea L.) colony on soil biogeochemistry and vegetation: a natural long-term in situ experiment in a planted pine forest. / // Front. Environ. Sci. Vol.11. Art. 1197657.
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Sinitca A.M. Multi-class segmentation of heterogeneous areas in biomedical and environmental images based on the assessment of local edge density / A.M. Sinitca, A.I. Lyanova, D.I. Kaplun, P.V. Zelenikhin, R.G. Imaev, A.M. Gafurov, B.M. Usmanov, D.V. Tishin, A.R. Kayumov, M.I. Bogachev // International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences - ISPRS Archives. - 2023. - Vol.48, Is.2/W3-2023. - P.233-238.
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Bogachev M.I. Reversal in the drought stress response of the Scots pine forest ecosystem: Local soil water regime as a key to improving climate change resilience / M.I. Bogachev, A.M. Gafurov, P.Y. Iskandirov, D.I. Kaplun, A.R. Kayumov, A.I. Lyanova, N.S. Pyko, S.A. Pyko, A.N. Safonova, A.M. Sinitca, B.M. Usmanov, D.V. Tishin // Heliyon. - 2023. - Vol.9, Is.11. - Art. №e21574.
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Baidamshina, D.R. The Effect of Ficin Immobilized on Carboxymethyl Chitosan on Biofilms of Oral Pathogens / D.R. Baidamshina, E.Yu. Trizna, S.S. Goncharova, A.V. Sorokin M.S. Lavlinskaya A.P. Melnik L.F. Gafarova, M.A. Kharitonova, O.V. Ostolopovskaya, V.G. Artyukhov, E.A. Sokolova, M.G. Holyavka, M.I. Bogachev, А.R. Kayumov, P.V. Zelenikhin // International Journal of Molecular Sciences – 2023. – V.24. – N 16090. https://doi.org/10.3390/ijms242216090
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Khabibrakhmanova, A.M. The novel chiral 2(5H)-furanone sulfones possessing terpene moiety: synthesis and biological activity / A.M. Khabibrakhmanova, R.G. Faizova, O.A. Lodochnikova, R.R. Zamalieva, L.Z. Latypova, E.Y. Trizna, A.G. Porfiryev, K. Tanaka, O. A. Sachenkov, A.R. Kayumov, A.R. Kurbangalieva // Molecules. – 2023. – V. 28, № 6. – Art. № 2543.
2022
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Nikitina L.E, Pavelyev R.S, Gilfanov I.R, Unraveling the Mechanism of Platelet Aggregation Suppression by Monoterpenoids//Bioengineering. - 2022. - Vol.9, Is.1. - Art. №24.
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Iskhakova Z, Zhuravleva D, Matigorova V, Kayumov A. The expression of novel PII-like protein from Lentilactobacillus hilgardii // IOP Conference Series: Earth and Environmental Science. - 2022. - Vol.978, Is.1. - Art. №012030.
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Iskhakova Z.I., Zhuravleva D.E., Heim C., Hartmann M.D., Laykov A.V., Forchhammer K., Kayumov A.R. PotN represents a novel energy-state sensing PII subfamily, occurring in firmicutes // FEBS Journal. - 2022.
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Nikitina, L.E.; Pavelyev, R.S.; Gilfanov, I.R.; Kiselev, S. V.; Azizova, Z.R.; Ksenofontov, A.A.; Bocharov, P.S.; Antina, E. V.; Klochkov, V. V.; Timerova, A.F.; et al. Unraveling the Mechanism of Platelet Aggregation Suppression by Monoterpenoids. Bioengineering 2022, 9, 24.
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Fedorova M.S, Mironova A.V, Kayumov A.R, Trizna E. Y. CELL-FREE SUPERNATANT OF STAPHYLOCOCCUS AUREUS CULTURE INCREASES ANTIMICROBIALS SUSCEPTIBILITY OF PSEUDOMONAS AERUGINOSA//Opera Medica et Physiologica. - 2022. - Vol.9, Is.3. - P.113-120.
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2021
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Sapozhnikov S.V, Sabirova A.E, Shtyrlin N.V, Design, synthesis, antibacterial activity and toxicity of novel quaternary ammonium compounds based on pyridoxine and fatty acids//European Journal of Medicinal Chemistry. - 2021. - Vol.211, Is.. - Art. № 113100.
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Guseva G.B, Antina E.V, Berezin M.B, Meso-substituted-BODIPY based fluorescent biomarker: Spectral characteristics, photostability and possibilities for practical application//Journal of Photochemistry and Photobiology A: Chemistry. - 2020. - Vol.401, Is.. - Art. № 112783.
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Baidamshina D.R, Koroleva V.A, Trizna E.Y, Pankova S.M.,Agafonova M.N., Chirkova M.N.,Vasileva O.S.,Akhmetov N.,Shubina V.V., Porfiryev A.G., Semenova E.V., Sachenkov O.A., Bogachev M.I., Artyukhov Va.G., Baltina T.V., Holyavka M.G., Kayumov A.R. Anti-biofilm and wound-healing activity of chitosan-immobilized Ficin//International Journal of Biological Macromolecules. - 2020. - Vol.164, Is.. - P.4205-4217.
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Zhuravleva D.E. Complete Genome Sequence of Lactobacillus hilgardii LMG 7934, Carrying the Gene Encoding for the Novel PII-Like Protein PotN/ D.E. Zhuravleva, Z.I. Iskhakova, G.D. Ozhegov, N.E. Gogoleva, D.R. Khusnutdinova, E.I. Shagimardanova, K. Forchhammer, A.R. Kayumov//Current Microbiology. - 2020. - Vol.77, Is.11. - P.3538-3545.
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Pavlova, A.S., Ozhegov, G.D., Arapidi, G.P. et al. Identification of Antimicrobial Peptides from Novel Lactobacillus fermentum Strain. Protein J 39, 73–84 (2020). https://doi.org/10.1007/s10930-019-09879-8
2019
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Sharafutdinov I. S. Unraveling the molecular mechanism of selective antimicrobial activity of 2(5H)-furanone derivative against Staphylococcus aureus / I. S. Sharafutdinov, A. S. Pavlova, F. S. Akhatova, A. M. Khabibrakhmanova, E. V. Rozhina, Y. J. Romanova, R. F. Fakhrullin, O. A. Lodochnikova, A. R. Kurbangalieva, M. I. Bogachev, A. R. Kayumov // Int. J. Mol. Sci. - 2019. - V. 20. - № 3. - P. 694. - doi: org/10.3390/ijms20030694.
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Sharafutdinov I. S. Targeting Bacillus cereus cells: increasing efficiency of antimicrobials by the bornylpossessing 2(5H)-furanone derivative / I. S. Sharafutdinov, A. S. Pavlova, A. M. Khabibrakhmanova, R. G. Faizova, A. R. Kurbangalieva, K. Tanaka, E. Y. Trizna, D. R. Baidamshina, M. I. Bogachev, A. R. Kayumov // New Microbiol. - 2019. - V. 42. - № 1. - P. 29-36.
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Trizna, E. Degrading of the Pseudomonas Aeruginosa Biofilm by Extracellular Levanase SacC from Bacillus subtilis / E. Trizna, M. Bogachev, A. Kayumov / Bionanoscience. - 2019. - V. 9 - P. 48-52.
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Kayumov A.R, Solovyev D.A, Bobrov D.E, Current Approaches to the Evaluation of Soil Genotoxicity//BioNanoScience. - 2019. - Vol., Is.. - .
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Gavrilova E, Anisimova E, Gabdelkhadieva A, Nikitina E, Vafina A, Yarullina D, Bogachev M, Kayumov A. Newly isolated lactic acid bacteria from silage targeting biofilms of foodborne pathogens during milk fermentation. BMC Microbiol. 2019 Nov 8;19(1):248. doi: 10.1186/s12866-019-1618-0.
- Baidamshina D., Semenova E., Sachenkov O., Baltina T., Zamaliev R., Kayumov A. Automatic processing and quantification of histological images//FEBS OPEN BIO. - 2019. - Vol.9, Is.. - P.312-313.
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Gavrilova E, Anisimova E, Gabdelkhadieva A, Newly isolated lactic acid bacteria from silage targeting biofilms of foodborne pathogens during milk fermentation//BMC Microbiology. - 2019. - Vol.19, Is.1. - Art. № 248.
- Iskhakova Z. The novel PII-like protein PotN from Lactobacillus brevis subsp. gravesensis interacts with the ABC-transporter ATPase PotA / Z. Iskhakova, D. Zhuravleva, K. Forchhammer, A. Kayumov // FEBS Open Bio. – 2019. – V. 9 (Suppl. 1). – P.409.
- Sharafutdinov I., Pavlova A., Laykov A., Proteomic changes in Bacillus subtilis caused by overexpression of HtrA protease//FEBS OPEN BIO. - 2019. - Vol.9, Is.. - P.427-427.
2018
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Holyavka M.G, Kayumov A.R, Baydamshina D.R, Efficient fructose production from plant extracts by immobilized inulinases from Kluyveromyces marxianus and Helianthus tuberosus//International Journal of Biological Macromolecules. - 2018. - Vol.115, Is.. - P.829-834.
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Bogachev M.I, Volkov V.Y, Markelov O.A, Fast and simple tool for the quantification of biofilm-embedded cells sub-populations from fluorescent microscopic images//PLoS ONE. - 2018. - Vol.13, Is.5. - Art. № e0193267.
- Holyavka, M. G. Efficient fructose production from plant extracts by immobilized inulinases from Kluyveromyces marxianus and Helianthus tuberosus / Holyavka, M. G. Kayumov, A. R., Baydamshina, D. R., Koroleva, V. A., Trizna, E. Yu., Trushin, M. V., Artyukhov, V. G. /International journal of biological macromolecules, (2018) Vol. 115., pp. 829-834 DOI: 10.1016/j.ijbiomac.2018.04.107.
- Holyavka M. G. Efficient fructose production from plant extracts by immobilized inulinases from Kluyveromyces marxianus and Helianthus tuberosus /M. G. Holyavka, A. R. Kayumov, D. R. Baydamshina, V. A. Koroleva, E. Yu. Trizna, M. V. Trushin, V. G. Artyukhov // International journal of biological macromolecules. - Vol. 115. - P. 829-834. DOI: 10.1016/j.ijbiomac.2018.04.107.
- Khafizov I. R., Kayumov A. R., Mirgazizov R. M., Assessing permeability of dental implant interfaces using microbiological assay.//MOLECULAR BIOLOGY OF THE CELL. - 2018. - Vol.29, Is.26. - .
- Bogachev M., Volkov V., Markelov O., Automated segmentation and analysis of DNA and protein electrophoresis gels//FEBS OPEN BIO. - 2018. - Vol.8, Is.. - P.452-452.
2017
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Kayumov A.R. Recombinant small heat shock protein from Acholeplasma laidlawii increases the Escherichia coli viability in thermal stress by selective protein rescue / A.R. Kayumov, M.I. Bogachev, V.A. Manuvera, V.N. Lazarev, A.V. Sabantsev, T.O. Artamonova, S.N. Borchsenius, I.E. Vishnyakov // Molecular Biology. - 2017. - V.51, Is.1. - P.112-121.
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Чернова Л.С. Гиперпродукция белка HtrA повышает выживаемость клеток Bacillus subtilis в условиях стресса и стимулирует формирование биопленки / Л.С. Чернова, И.С. Шарафутдинов, А.Р. Каюмов А.Р. // Учен. зап. Казан. ун-та. Сер. Естеств. науки. – 2017. – Т.159, кн.2. – С.262–271.
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Baidamshina D.R. Targeting microbial biofilms using Ficin, a nonspecific plant protease / D.R. Baidamshina, E.Y. Trizna, M.G. Holyavka, M.I. Bogachev, V.G. Artyukhov, F.S. Akhatova, E.V. Rozhina, R.F. Fakhrullin, A.R. Kayumov // Scientific Reports. - 2017. - V.7. - Art. № 46068.
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Holyavka M.G. Trypsin immobilization on the Chitosan matrix of various molecular weights / Holyavka M.G., Kayumov A.R., Loginova O.O., Baydamshina D.R., Trizna E.Y., Sazykina S.M., Belenova A.S., Artyukhov V.G., Slivkin A. // Russian Journal of Biopharmaceuticals. - 2017. - V.9, Is.4. - P.31-37.
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Sapozhnikov S.V. New quaternary ammonium pyridoxine derivatives: synthesis and antibacterial activity / S.V. Sapozhnikov, N.V. Shtyrlin, A.R. Kayumov, A.E. Zamaldinova, A.G. Iksanova, Е.V. Nikitina, Е.S. Krylova, D.Yu. Grishaev, K.V. Balakin, Y.G. Shtyrlin // Medicinal Chemistry Research. - 2017. - V.26(12). - P. 3188-3202.
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Markelov O. Statistical model for the synthetic DNA adaptation to the environmental conditions / O. Markelov, A. Kayumov, M. Bogachev // FEBS JOURNAL. - 2017. - V.284. - P.309.
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Sharafutdinov I. The antimicrobial effect of the 5-((-)bornyloxy)-2(5H)-furanone derivative on grampositive bacteria / I. Sharafutdinov , A. Pavlova , A. Khabibrakhmanova , A. Kurbangalieva, A. Kayumov // FEBS JOURNAL. - 2017. - V.284. - P.143.
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Holyavka M. The immobilization of ficin, a nonspecific plant protease, for the biomedical applications as a wound-healing agent / M. Holyavka, V. Koroleva, D. Baidamshina, E. Trizna, M. Kondratyev, A.
Kayumov, V. Artyukhov // FEBS JOURNAL. - 2017. - V.284. - P.374.
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Nikitina E.V. Elucidation of the Mode of Action of New Antibacterial Bis-Phosphonium Salts of Pyridine Derivatives Active Against Staphylococcus aureus / E.V. Nikitina, M.I. Zeldi, R.M. Vafina, M.V. Pugachev, N.V. Shtyrlin, S.V. Kuznetsova, V.G. Evtugyn, A.R. Kayumov, Y.G. Shtyrlin // RESEARCH JOURNAL OF PHARMACEUTICAL BIOLOGICAL AND CHEMICAL SCIENCES. - 2017. - V.8, Is.3. - P.1906-1915.
- Olshannikova S. Development of biocatalysts on the basis of immobilized inulinase preparations / S. Olshannikova, M. Holyavka,V. Koroleva, A. Belenova, S. Makin, M. Kondratyev, A. Samchenko, A. Kabanov, D. Podporin, A. Kayumov, V. Artyukhov // Journal of Biotechnology. - 2017. - V.256. - P.S64-S65.
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Hafizova F.A. Exploring the Integration of Threaded Implants: the Chemical Deep Etching Approach / F.A.Hafizova, R.M. Mirgazizov, R.G. Hafizov, A.M. Mirgazizov, D.E. Tsyplakov, I.R. Hafizov, D.A. Azizova, M.A. Sergeev, A.R. Kayumov, M.Z. Mirgazizov // BioNanoScience. – 2017. – V.5. – №3. – Р.1-6. DOI 10.1007/s12668-017-0468-1.
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Sharafutdinov I. S. Antimicrobial effects of sulfonyl derivative of 2(5H)-furanone against planktonic and biofilm associated methicillin-resistant and -susceptible Staphylococcus aureus / Sharafutdinov I.S., Trizna E.Y., Baidamshina D.R., Ryzhikova M.N., Sibgatullina R.R., Khabibrakhmanova A.M., Latypova L.Z., Kurbangalieva A.R., Rozhina E.V., Klinger-Strobel M., Fakhrullin R.F., Pletz M.W., Bogachev M.I., Kayumov A.R., Makarewicz O. // Front. Microbiol. - 2017. - V.8. - Art №2246.
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Garipov M.R. Fluconazole-Pyridoxine Bis-Triazolium Compounds with Potent Activity against Pathogenic Bacteria and Fungi Including Their Biofilm-Embedded Forms / M.R. Garipov, R.S. Pavelyev, S.A. Lisovskaya, E.V. Nikitina, A.R. Kayumov, A.E. Sabirova, O.V. Bondar, A.G. Malanyeva, A.M. Aimaletdinov, A.G. Iksanova, K.V. Balakin, Y.G. Shtyrlin // Journal of Chemistry. - 2017. - Art. №4761650.
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Bogachev M.I. Corrigendum: Superstatistical model of bacterial DNA architecture / M.I. Bogachev, O.A. Markelov, A.R. Kayumov, A. Bunde // Scientific reports. - 2017. - V.7. - P.46917.
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Sharafutdinov I.S. Antimicrobial Effects of Sulfonyl Derivative of 2 (5H)-Furanone against Planktonic and Biofilm Associated Methicillin-Resistant and-Susceptible Staphylococcus aureus / I.S. Sharafutdinov, E.Y. Trizna, D.R. Baidamshina, M.N. Ryzhikova, R.R. Sibgatullina, A.M. Khabibrakhmanova, L.Z. Latypova, A.R. Kurbangalieva, E.V. Rozhina, M. Klinger-Strobel, R.F. Fakhrullin, M.W. Pletz, M.I. Bogachev, A.R. Kayumov, O. Makarewicz // Frontiers in microbiology. - 2017. - V.8. - P.2246.
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Bogachev M. Fast and Simple Tool for the Quantification of Biofilm-Embedded Cells Sub-Populations From Fluorescent Microscopic Images / M.Bogachev, O. Markelov, E. Trizna, D. Baydamshina, P. Zelenikhin, R. Murtazina, A. Kayumov // BioRxiv. - 2017. – P.181495.
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Bogachev M.I. Superstatistical model of bacterial DNA architecture / Bogachev M.I., Markelov O.A., Kayumov A.R. // Scientific Reports. - 2017. - V.7. - Art. № 43034.
2016
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Nikitina E.V. Antibacterial effects of quaternary bis-phosphonium and ammonium salts of pyridoxine on Staphylococcus aureus cells: A single base hitting two distinct targets? / Nikitina E.V., Zeldi M. I., Pugachev M.V., Sapozhnikov S.V., Shtyrlin N.V., Kuznetsova S.V., Evtygin V.E., Bogachev M.I., Kayumov A.R., Shtyrlin Y.G. // World Journal of Microbiology and Biotechnology. - 2016. - V.32, Is.1.
Nikitina_et_al__pravka__3.pdf - Хафизов Р.Г. Клинико-лабораторная и микробиологическая оценка качества интерфейса «имплант-абатмент« / Р.Г.Хафизов, Р.М.Миргазизов, Ф.А. Хафизова, А.Р.Каюмов , И.Р.Хафизов // МАЭСТРО стоматологии. - 2016.-№62. -С.26-31.
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Ilinskaya O. N. Direct inhibition of oncogenic KRAS by Bacillus pumilus ribonuclease (binase) /O. N. Ilinskaya, I. Singh, E. Dudkina, V. Ulyanova, A. Kayumov, G. Barreto // Biochim Biophys Acta. 2016 V. 1863. I. 7. P. 1559-1567. doi: 10.1016/j.bbamcr.2016.04.005.
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Ilinskaya O.N, Singh I, Dudkina E , Ulyanova V., Kayumov A., Barreto G. Direct inhibition of oncogenic KRAS by Bacillus pumilus ribonuclease (binase)//Biochimica et Biophysica Acta - Molecular Cell Research. - 2016. - Vol.1863, Is.7. - P.1559-1567. https://doi.org/10.1016/j.bbamcr.2016.04.005
- Sharafutdinov I., Trizna E., Ryzhikova M., Muhametzyanova S., Latypova L., Kurbangalieva A., Rozhina E., Makarewizc O., Kayumov A. The antimicrobial activity of 2 (5H)-furanone derivative on Staphylococcus aureus // FEBS J. - 2016. - V.283. - P.200-201. doi:10.1111/febs.13808
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Vedyaykin A.D. Recombinant FtsZ Proteins from Mollicutes Interactwith Escherichia coli Division Machinery / A.D. Vedyaykin, A.V. Sabantsev, M.A. Khodorkovskii, A.R. Kayumov, I.E. Vishnyakov // BioNanoScience. - 2016. DOI: 10.1007/s12668-016-0248-3.
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Vishnyakov I.E. The Temperature-Dependent Selectivity of Potential Interaction Partners for the Small Heat Shock Protein IbpA from Acholeplasma laidlawii /I.E. Vishnyakov, M. Bogachev, I. Salafutdinov, S.N. Borchsenius, A.R. Kayumov // BioNanoScience. - 2016. DOI: 10.1007/s12668-016-0259-0.
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Trizna E. 2(5H)-Furanone Derivatives as Inhibitors of Staphylococcal Biofilms / E. Trizna, L. Latypova, A. Kurbangalieva, M. Bogachev, A. Kayumov // BioNanoScience. - 2016. DOI: 10.1007/s12668-016-0258-1.
- Sharafutdinov I. HtrA protease from Bacillus subtilis suppresses the bacterial fouling of the rat skin injuries / I. Sharafutdinov, Z. Shigapova, M. Baltin, N. Akhmetov, M. Bogachev, A. Kayumov // BioNanoScience. – 2016 – V.6(4). – P.564-567.
- Vishnyakov I.E. Mycoplasma diversity in Arctic permafrost / Vishnyakov I.E., Borchsenius S.N., Kayumov A.R., Rivkina E.M. // BioNanoScience. - 2016. doi: 10.1007/s12668-016-0280-3.
- Iskhakova Z. The preliminary characterization of P-II like protein GlnK from Lactobacillus brevis / Z. Iskhakova, D. Zhuravleva, A. Laykov, K.Forchhammer, A. Kayumov // FEBS Journal. – 2016. – V.283 (Suppl. 1). – P.228.
- Markelov O. Characterization of unknown proteins: Additional information available from MALDITOF mass spectrometry data / O. Markelov, A. Kayumov, M. Bogachev // FEBS Journal. – 2016. – V.283 (Suppl. 1). – P.238. DOI: 10.1111/febs.13808.
- Baidamshina D. The effect of ficin, a non-specific plant protease, on staphylococcal biofilms disruption / D. Baidamshina, E. Trizna, F. Akhatova, M. Holyavka, E. Rozhina, R. Fakhrullin, M. Bogachev, A. Kayumov // FEBS Journal. – 2016. – V.283 (Suppl. 1). – P.289.
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Nikitina E.V, Zeldi M.I, Pugachev M.V, Antibacterial effects of quaternary bis-phosphonium and ammonium salts of pyridoxine on Staphylococcus aureus cells: A single base hitting two distinct targets?//World Journal of Microbiology and Biotechnology. - 2016. - Vol.32, Is.1. - P.1-7.
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Sharafutdinov I, Shigapova Z, Baltin M, HtrA Protease from Bacillus subtilis Suppresses the Bacterial Fouling of the Rat Skin Injuries // BioNanoScience. - 2016. - Vol.6, Is.4. - P.564-567.
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Shtyrlin N.V, Sapozhnikov S.V, Galiullina A.S, Synthesis and Antibacterial Activity of Quaternary Ammonium 4-Deoxypyridoxine Derivatives//BioMed Research International. - 2016. - Vol.2016, Is.. - Art. № 3864193.
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Sharafutdinov I., Trizna E., Ryzhikova M., The antimicrobial activity of 2 (5H)-furanone derivative on Staphylococcus aureus // FEBS JOURNAL. - 2016. - Vol.283, Is.. - P.200-201.
- Baidamshina D., Trizna E., Akhatova F., The effect of ficin, a non-specific plant protease, on staphylococcal biofilms disruption//FEBS JOURNAL. - 2016. - Vol.283, Is.. - P.289-289.
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Байдамшина Д. Р. Оценка генотоксичности и цитотоксичности препаратов иммобилизованного на матрице хитозана трипсина /Д.Р. Байдамшина, Е. Ю. Тризна, М. Г. Холявка, О. О. Логинова, С. М. Сазыкина,В. Г. Артюхов, А. Р. Каюмов // Вестник ВГУ. - 2016. - №3. - 53-57.
khimbiofarm_3_16.pdf -
Bogachev, M. Statistical prediction of protein structural, localization and functional properties by the analysis of its fragment mass distributions after proteolytic cleavage / M. Bogachev, A.R. Kayumov, O. Markelov, Armin Bunde // SCIENTIFIC REPORTS. - 2016. - V.6.
2015
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Frolova L.L. Evaluation of the Ecological State Of Water Reservoirs Using the COI Protein of Zooplankton / L.L Frolova, A.R. Kayumov, A.M. Husainov // Research Journal of Pharmaceutical, Biological and Chemical Sciences (RJPBCS). - 2015. - V.6(4). - P.82-94.
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Kayumov A. R. Inhibition of biofilm formation in Bacillus subtilis by new halogenated furanones / A. R. Kayumov, E. N. Khakimullina, I. S. Sharafutdinov, E. Y. Trizna, L. Z. Latypova, T. L. Hoang, A. B. Margulis, M. I. Bogachev, A. R. Kurbangalieva // Journal of Antibiotics. - 2015. - V. 68. - № 5 - P. 297-301.
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Trizna E. Yu. Thio Derivatives of 2(5H)-Furanone as Inhibitors against Bacillus subtilis Biofilms / E. Yu. Trizna, E.N. Khakimullina, L.Z. Latypova, A.R. Kurbangalieva, I.S. Sharafutdinov, V.G. Evtyugin, E.V. Babynin, M.I. Bogachev, A.R. Kayumov // Acta Naturae. - 2015. - V.7(2). - P. 102-107.
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Trizna E. Yu. Thio Derivatives of 2(5H)-Furanone as Inhibitors against Bacillus subtilis Biofilms / E. Yu. Trizna, E.N. Khakimullina, L.Z. Latypova, A.R. Kurbangalieva, I.S. Sharafutdinov, V.G. Evtyugin, E.V. Babynin, M.I. Bogachev, A.R. Kayumov // Acta Naturae. - 2015. - V.7(2). - P. 102-107.
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Тризна Е. Ю., Хакимуллина Э. Н., Латыпова Л. З., Курбангалиева А. Р., Шарафутдинов И. С., Евтюгин В. Г., Бабынин Э. В., Богачев М. И., Каюмов А. Р. Ингибиторы образования биопленок бактериями bacillus subtilis на основе тиопроизводных 2(5н)-фуранона // ActaNaturae - 2015 - Т.7. - С.110-116.
- Вишняков И.Е. ДНК «минимальных» клеток (микоплазм) в метагеномах вечной мерзлоты / Вишняков И.Е., Борхсениус С.Н., Каюмов А.Р., Шмакова Л.А., Ривкина Е.М. // Гены & Клетки. - 2015. - Том X, №3. - С.12-21.
- Shtyrlin Nikita V., Sapozhnikov Sergey V., Koshkin Sergey A., Synthesis and Antibacterial Activity of Novel Quaternary Ammonium Pyridoxine Derivatives//MEDICINAL CHEMISTRY. - 2015. - Vol.11, Is.7. - P.656-665.
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Kayumov A.R, Nureeva A.A, Trizna E.Y, New derivatives of pyridoxine exhibit high antibacterial activity against biofilm-embedded staphylococcus cells//BioMed Research International. - 2015. - Vol.2015, Is.. - Art. № 890968.
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Trizna EYu, Baydamshina DR, Kholyavka MG, Sharafutdinov IS, Khairutdinova AR, Khafizova FA, Zakiroca EYu, Khafizov RG, Kayumov AR. Soluble and immobilized papain and trypsin as destroyers of bacterial biofilms // Genes and Cells. - 2015. - Vol.10, Is.3. - P.106-112.
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Тризна Е. Ю. Ингибиторы образования биопленок бактериями Bacillus subtilis на основе тиопроизводных 2(5H)-фуранона / Е. Ю. Тризна, Э. Н. Хакимуллина, Л. З. Латыпова, А. Р. Курбангалиева, И. С. Шарафутдинов, В. Г. Евтюгин, Э. В. Бабынин, М. И. Богачев, А. Р. Каюмов // Acta Naturae. - 2015. - Т. 7. - № 2 (25). - С. 110–116.
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Hauf K. The molecular basis of TnrA control by glutamine synthetase in Bacillus subtilis / K.Hauf, A. Kayumov, Felix Gloge, Karl Forchhammer // Journal of biological chemistry. - 2015. - Vol.12.
J._Biol._Chem._2015.pdf
2014
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Dudkina E. New insight into secreted ribonuclease structure: binase is a natural dimer / Dudkina E., Kayumov A., Ulyanova V., Ilinskaya O. // PLoS One. - 2014. - V. 9(12). - P. e115818. doi:10.1371/journal.pone.0115818.
journal.pone.0115818.pdf - Bogachev M. I., Kayumov A. R., Bunde A. Universal internucleotide statistics in full genomes: A footprint of the DNA structure and packaging? // Plos One. - December 1, 2014. Doi: 10.1371/journal.pone.0112534.
- A.R. Kayumov, A.Yu. Ratushnyak, A.A. Ratushnyak, A. Gabdelkhadeeva, M.G. Andreeva, M.V. Trushin Glutamine Synthetase, Peroxidase and Protease as Indicators of the Ecological State of Higher Aquatic Plants // Middle-East Journal of Scientific Research. - 2014. - V.19(2). - P.139-143.
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Хафизов Р.Г. Оценка качества изготовления интерфейса имплантат-абатмент / И.Р. Хафизов, М.З. Миргазизов, А.Р. Каюмов, А.А. Ризванов, А.Р. Хайрутдинова // Биосовместимые материалы и новые технологии в стоматологии: сборник статей Международной конференции. 27-28 ноября. - Казань: Изд-во Казан ун-та, 2014. - С. 140-144.
OCENKA_KAChESTVA_IZGOTOVLENIYa_INTERFEJSA140.pdf -
Glutamine Synthetase, Peroxidase and Protease as Indicators of the Ecological State of Higher Aquatic Plants
idosi.pdf -
Бруслик Н.Л., Каюмов А.Р., Богачев М.И., Яруллина Д.Р. Сравнительная характеристика амилолитической активности грамположительных бактерий // Вестник Воронежского государственного университета. Серия: Химия. Биология. Фармация. - 2014. - № 2. - С.47-51.
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Dudkina E. New insight into secreted ribonuclease structure: binase is a natural dimer / E. Dudkina, A. Kayumov, V. Ulyanova, O. Ilinskaya // PLoS One. - 2014. - V. 9(12). - P. e115818. doi:10.1371/journal.pone.0115818.
New_Insight_into_Secreted_Ribonuclease.pdf
2013
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Ksenia Fedorova, Airat Kayumov, Kathrin Woyda, Olga Ilinskaja, Karl Forchhammer. Transcription factor TnrA inhibits the biosynthetic activity of glutamine synthetase in Bacillus subtilis // Febs Letter. - 2013. - V. 587, I. 9. - P. 1293-1298.
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Kayumov A.R., Fedorova K.P., Woyda K., Forchhammer K. Transcription factor TnrA represses the biosynthetic activity of glutamine synthetase in Bacillus subtilis // FEBS J. – 2013. – V. 280, Issue Supplement s1. – P. 228.
- K.P. Fedorova, I.S. Scharafutdinov, E.Y. Turbina, M.I. Bogachev, O.N. Ilinskaja, A.R. Kayumov Terminus of Transcription Factor TnrA from Bacillus subtilis Controls DNA-Binding Domain Activity but Is Not Required for Dimerization // Molecular Biology. - 2013. - V. 47. - № 2, Р. 293–298.
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Fedorova K, Kayumov A, Woyda K, Transcription factor TnrA inhibits the biosynthetic activity of glutamine synthetase in Bacillus subtilis//FEBS Letters. - 2013. - Vol.587, Is.9. - P.1293-1298.
- Шарафутдинов И.С., Федорова К.П., Каюмов А.Р. Влияние белка GlnK и глутаминсинтетазы на ДНК-связывающую активность фактора TnrA in vitro // Сборник научных статей Казанского федерального университета. Казань – 2013. – С.231-233.
- М.И. Богачев, А.Р. Каюмов, О.А. Маркелов, В.А. Миронов Экстраполяция статистических маркеров мутагенеза для биоиндикаторных организмов различного уровня эволюционного развития // Биомедицинская радиоэлектроника. - 2013. - № 11. - С.65-70.
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М.И. Богачёв, О.А. Маркелов, В.Н. Михайлов, А.Р. Каюмов, П.В. Прудников, Д.В. Тишин Оценка эффективности линейных и нелинейных методов прогнозирования выбросов данных физиологического и экологического мониторингов // Известия высших учебных заведений России. Радиоэлектроника. - 2013. - Т. 1. - С.54-59.
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Богачев М.И. Статистическая модель воздействия основных мутагенных факторов на биосистемы / М.И. Богачев, А.Р. Каюмов, О.А. Маркелов, Е.О. Михайлова // Вестник Казанского технологического университета. - 2013. - Т.16. - №10. - С.179-181.
- К. П. Федорова, И.С. Шарафутдинов, Н.В. Тарасов, Е.О.Михайлова, О. Н. Ильинская, А. Р. Каюмов Различное влияние глутаминсинтетазы на ДНК-связывающую активность факторов транскрипции TnrA и GlnR из Bacillus subtilis // Вестник Казанского технологического университета. - 2013. – Т.16. - №10. – С.198-200.
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Fedorova K.P, Scharafutdinov I.S, Turbina E.Y, C-terminus of transcription factor TnrA from Bacillus subtilis controls DNA-binding domain activity but is not required for dimerization // Molecular Biology. - 2013. - Vol.47, Is.2. - P.293-298.
2012
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A.Yu. Ratushnyak, A.A. Ratushnyak, M.G. Andreeva, A.R. Kayumov, M.I. Bogachev, M.V. Trushin Effect of Lead and Salicylic Acid on Some Plant Growth Parameters in Pisum sativum L. // World Applied Sciences Journal. - 2012. - V. 19 (8). - P. 1157-1159.
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Ratushnyak A.Y, Ratushnyak A.A, Andreeva M.G, Effect of lead and salicylic acid on some plant growth parameters in Pisum sativum L//World Applied Sciences Journal. - 2012. - Vol.19, Is.8. - P.1157-1159.
- М. И. Богачев, Е. О.Михайлова, А. Р. Каюмов. Статистический анализ белков-субстратов протеиназы ClpP в клетках Bacillus subtilis // Вестник Казанского технологического университета. - 2012. - №15. - C. 225-227.
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Федорова К.П., Тарасов Н.В., Халитова А.В., Ильинская О.Н., Барабанщиков Б.И., Каюмов А.Р. Влияние белков AmtB, GlnK и глутаминсинтетазы на активность фактора транскрипции TnrA в клетках Bacillus subtilis // Цитология. - 2012. - Т.54. - №12. - С.898-901.
- Мухаметшин А.Т., Богачев М.И., Каюмов А.Р., Маркелов О.А. Идентификация распределения гидрофобных областей и пространственного заряда в первичной структуре биомолекул // Биомедицинская радиоэлектроника. - 2012. - №1. - С. 41-44.
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Каюмов А.Р., Халитова А.В., Федорова К.П., Шмакова Л.А., Михайлова Е.О., Ильинская О.Н. Влияние глутаминсинтетазы на активность фактора транскрипции TnrA в клетках Bacillus subtilis // Вестник Казанского технологического университета. - 2012. - Т. 15. № 21. - С. 111-114.
- О.А. Маркелов, М.И. Богачев, А.Р. Каюмов, А.А. Соколова. Аналитическое решение задачи интервальных статистик выбросов для модели мультипликативного каскада // Биомедицинская радиоэлектроника. - 2012. - №1. - С.45-48.
- А. Р. Каюмов, Е. О.Михайлова, М. И. Богачев. Статистический анализ геномов биоиндикаторных организмов // Вестник Казанского технологического университета. - 2012. - №15. - С. 228-230.
- Т.А. Ковалева, М.Г. Холявка, В.Г. Артюхов, А.Р. Каюмов. Анализ ферментативной активности и ик-спектров инулиназы, иммобилизованной на анионообменной смоле АВ-17-2П // Вопросы биологической, медицинской и фармацевтической химии. - 2012. - №11. - С. 39-42.
- А.Б. Маргулис, А.Р.Курбангалиева, Н.В. Белоногова, Л.З.Латыпова, В.Я.Пономарев, Э.Н.Хакимуллина, Е.Ю.Тризна, М.И.Богачев, А.Р.Каюмов Влияние хлорпроизводных 2(5Н)-фуранона на жизнеспособность бактериальных клеток // Вестник Казанского технологического университета.- 2012.- Т. 15, №15.- С. 220-224.
- Е.О. Михайлова, А.Р. Каюмов, О.А. Маркелов, А.А. Хамидуллина, Л.Р. Хисамеева, М.И. Богачев. Анализ первичной структуры в белковых токсинов болезнетворных водных бактерий // Биомедицинская радиоэлектроника. - 2012. - №1. - С.37-40.
2011
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Airat Kayumov, Annette Heinrich, Kseniya Fedorova, Olga Ilinskaya, Karl Forchhammer.Interaction of the general transcription factor TnrA with the PII-like protein GlnK and glutamine synthetase in Bacillus subtilis // FEBS Journal. - 2011. - V.278. - P.1779-1789.
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Kayumov A, Heinrich A, Fedorova K, Interaction of the general transcription factor TnrA with the PII-like protein GlnK and glutamine synthetase in Bacillus subtilis//FEBS Journal. - 2011. - Vol.278, Is.10. - P.1779-1789.
- Богачев М.И., Каюмов А.Р., Маркелов О.А. Алгоритм предварительного отбора белковых последовательностей для множественного выравнивания в условиях априорной неопределенности на основе теории графов // Биотехносфера. - 2011. - №5. - С.7-11.
- Богачев М.И., Каюмов А.Р. Исследование статистических свойств первичной структуры факторов патогенности белковой природы // Биомедицинская радиоэлектроника. - 2011. - №5. - С.24-27.
- Каюмов А.Р., Богачев М.И., Михайлова Е.О. Сравнительный анализ первичной структуры белковых токсинов водных патогенных микроорганизмов // Вестник Казанского технологического университета. - 2011. - №8. - С.175-180.
2010
- Н.Л.Рудакова, А.Р.Сабирова, А.Р.Каюмов, А.М.Марданова, Н.П.Балабан, М.Р. Шарипова Секретируемая металлопротеиназа Bacillus intermedius: получение гомогенного препарата фермента и исследование физико-химических свойств // Ученые Записки Казанского университета. Серия Естественные науки. - 2010. - Т.152, кн. 2. - С.145-155.
- А. Р. Каюмов, К. П. Федорова, О. Н. Ильинская, М. Р. Шарипова Содержание и локализация регуляторных белков TnrA и GlnK в клетках Bacillus subtilis в условиях азотного голодания // Молекулярная биология. - 2010. - Т. 44. - № 4. - С. 743-745.
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М.И.Богачев, А.Р. Каюмов, Е.О.Михайлова. Анализ структуры сигналов и функциональной организации биокаталитических систем с использованием математического аппарата интервальных статистик // Известия высших учебных заведений России - Радиоэлектроника. - 2010. - № 3. - С. 8-16.
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Рудакова Н.Л. Секретируемая металлоэндопептидаза Bacillus intermedius: получение гомогенного препарата фермента и исследование физико-химических свойств / Рудакова Н.Л., Сабирова А.Р., Каюмов А.Р., Марданова А.М., Балабан Н.П., Шарипова М.Р. // Учен. зап. Казан. ун-та. Сер. Естеств. науки. – 2010. – Т.152, кн.2. – С. 145-154.
Rudakova_UZ_2010.pdf -
Черёмин А.М., Тойменцева А.А., Сабирова А.Р., Каюмов А.Р., Маргулис А.Б., Шарипова М.Р. Выделение регуляторных белков, активирующихся в условиях ограниченного роста бацилл // Ученые записки Казанского университета. Серия: Естественные науки. - 2010. - Т. 152. № 4. - С. 156-168.
- М.И.Богачев, А.Р.Каюмов Сравнительный анализ первичной структуры белков патогенных и непатогенных микроорганизмов при помощи математического аппарата интервальных статистик // Биомедицинская радиоэлектроника. - 2010. - №11. - С. 4-9.
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Тойменцева А.А., Шагимарданова Е.И., Каюмов А.Р., Шарипова М.Р. Влияние делеций в промоторе на экспрессию гена глутамилэндопептидазы Bacillus intermedius // Ученые Записки Казанского университета. Серия Естественные науки. - 2010. - Т.152, кн.3. - С.149-159.
2009
2008
2006
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Ю.М.Кириллова, Е.О.Михайлова, Н.П.Балабан, А.М.Марданова, А.Р.Каюмов, Г.Н.Руденская, С.В.Костров, М.Р. Шарипова Особенности биосинтеза субтилизиноподобной сериновой протеиназы Bacillus intermedius рекомбинантным штаммом Bacillus subtilis // Микробиология. - 2006. - Т.75, №2. - С.179-185.
- А.Р. Каюмов, Н.П. Балабан, А.М. Марданова, С.В. Костров, М.Р. Шарипова Биосинтез субтилизиноподобной сериновой протеиназы Bacillus intermedius в условиях солевого стресса // Микробиология. - 2006. - Т.75, №5. - С.557-563.
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