KFU. Card publication. Diversity of the expression profiles of late embryogenesis abundant (LEA) protein encoding genes in the anhydrobiotic midge Polypedilum vanderplanki

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DIVERSITY OF THE EXPRESSION PROFILES OF LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN ENCODING GENES IN THE ANHYDROBIOTIC MIDGE POLYPEDILUM VANDERPLANKI

Form of presentation

Articles in international journals and collections

Year of publication

2015

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Authors, employees of KFU

Gusev Oleg Aleksandrovich, author

Kikavada Takhakiro , author

Bibliographic description in the original language

Diversity of the expression profiles of late embryogenesis abundant (LEA) protein encoding genes in the anhydrobiotic midge Polypedilum vanderplanki Rie Hatanaka, Oleg Gusev, Richard Cornette, Sachiko Shimura, Shingo Kikuta, Jun Okada, Takashi Okuda, Takahiro Kikawada R Hatanaka, O Gusev, R Cornette, S Shimura, S Kikuta, J Okada, T Okuda, ... Planta, 1-9, 242 (2) 2015

Annotation

The larvae of the anhydrobiotic midge, P. vanderplanki, which can tolerate almost complete desiccation, accumulate late embryogenesis abundant (LEA) proteins in response to drying. Using complete genome data of the midge, we have identified 27 PvLea1-like genes based on the similarity to previously characterized PvLea1 gene belonging to group 3 LEA proteins. Generally, group 3 LEA proteins are characterized by several repetitions of an 11-mer motif. However, some PvLea genes lack the canonical motif in their sequences. We performed the detailed characterization of all 27 PvLea genes in terms of biochemical and biophysical properties and conserved motifs. The motif analysis among their amino acid sequences revealed that all 27 PvLEA proteins have at least one of two types of motifs (motif 1: G AKDTTKEKLGE AKDATAEKLG or motif 2: KD ILExAKDKLxD AKDAVKEKL), indicating the presence of at least two repeated 11-mer LEA motifs. Most of PvLEA proteins were localized to the cytosol. We also perf

Keywords

anhydrobiosis, chironomid, Lea proteins

The name of the journal

Planta

URL

http://link.springer.com/article/10.1007/s00425-015-2284-6

Please use this ID to quote from or refer to the card

https://repository.kpfu.ru/eng/?p_id=121021&p_lang=2

Resource files

File name	Size (MB)	Format
art%3A10.1007%2Fs00425_015_2284_6.pdf	0,76	pdf	show / download

Full metadata record

Field DC	Value	Language
dc.contributor.author	Gusev Oleg Aleksandrovich	ru_RU
dc.contributor.author	Kikavada Takhakiro	ru_RU
dc.date.accessioned	2015-01-01T00:00:00Z	ru_RU
dc.date.available	2015-01-01T00:00:00Z	ru_RU
dc.date.issued	2015	ru_RU
dc.identifier.citation	Diversity of the expression profiles of late embryogenesis abundant (LEA) protein encoding genes in the anhydrobiotic midge Polypedilum vanderplanki Rie Hatanaka, Oleg Gusev, Richard Cornette, Sachiko Shimura, Shingo Kikuta, Jun Okada, Takashi Okuda, Takahiro Kikawada R Hatanaka, O Gusev, R Cornette, S Shimura, S Kikuta, J Okada, T Okuda, ... Planta, 1-9, 242 (2) 2015	ru_RU
dc.identifier.uri	https://repository.kpfu.ru/eng/?p_id=121021&p_lang=2	ru_RU
dc.description.abstract	Planta	ru_RU
dc.description.abstract	The larvae of the anhydrobiotic midge, P. vanderplanki, which can tolerate almost complete desiccation, accumulate late embryogenesis abundant (LEA) proteins in response to drying. Using complete genome data of the midge, we have identified 27 PvLea1-like genes based on the similarity to previously characterized PvLea1 gene belonging to group 3 LEA proteins. Generally, group 3 LEA proteins are characterized by several repetitions of an 11-mer motif. However, some PvLea genes lack the canonical motif in their sequences. We performed the detailed characterization of all 27 PvLea genes in terms of biochemical and biophysical properties and conserved motifs. The motif analysis among their amino acid sequences revealed that all 27 PvLEA proteins have at least one of two types of motifs (motif 1: G AKDTTKEKLGE AKDATAEKLG or motif 2: KD ILExAKDKLxD AKDAVKEKL), indicating the presence of at least two repeated 11-mer LEA motifs. Most of PvLEA proteins were localized to the cytosol. We also perf	ru_RU
dc.language.iso	ru	ru_RU
dc.subject	anhydrobiosis	ru_RU
dc.subject	chironomid	ru_RU
dc.subject	Lea proteins	ru_RU
dc.title	Diversity of the expression profiles of late embryogenesis abundant (LEA) protein encoding genes in the anhydrobiotic midge Polypedilum vanderplanki	ru_RU
dc.type	Articles in international journals and collections	ru_RU