• This report presents transcriptome datasets for Escherichia coli MG1655 treated with novobiocin, rifampicin, and tetracycline. Clusters of genes that respond to inhibition of RNA synthesis, protein synthesis, and DNA gyrase activity have been identified. The data may help to understand the mechanisms of general and specific resistance in E. coli.

• Tsers I. et al. First genome-scale insights into the virulence of the snow mold causal fungus Microdochium nivale //IMA fungus. ? 2023. ? Т. 14. ? №. 1. ? С. 1-20.
• Oxana A. Sofinskaya, Oleg Y. Andrushkevich, Bulat M. Galiullin, Nataliya E. Gogoleva, Nurislam M. Shaikhutdinov, Eduard A. Korolev, Fedor A. Mouraviev, and Rustem M. Usmanov. Surface Properties of Carbonate Speleothems in Karst Caves Changing Under Biofilms // O. V. Frank-Kamenetskaya et al. (eds.), Biogenic—Abiogenic Interactions in Natural and Anthropogenic Systems 2022, Springer Proceedings in Earth and Environmental Sciences. 2023. - PP. 495-511
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• Tsers, I., Parfirova, O., Moruzhenkova, V., Petrova, O., Gogoleva, N., Vorob'ev V., Gogolev, Y., Gorshkov, V. A Switch from Latent to Typical Infection during Pectobacterium atrosepticum—Tobacco Interactions: Predicted and True Molecular Players. International Journal of Molecular Sciences. 24(17), 13283.
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• Tsers, I., Marenina, E., Meshcherov, A., Petrova, O., Gogoleva, O., Tkachenko, A., Gogoleva, N., Gogolev, Y., Potapenko, E., Muraeva, O., Ponomareva, M., Korzun, V., Gorshkov, V. First genome-scale insights into the virulence of the snow mold causal fungus Microdochium nivale. IMA fungus, 2023. V. 14(1), I. 2. pp. 1-20
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• Petrova, O., Parfirova, O., Gogoleva, N., Vorob'ev, V., Gogolev, Y., Gorshkov, V. (2023). The Role of Intercellular Signaling in the Regulation of Bacterial Adaptive Proliferation. International Journal of Molecular Sciences, 24(8), 7266
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• Gorshkov, V. Y., Toporkova, Y. Y., Tsers, I. D., Smirnova, E. O., Ogorodnikova, A. V., Gogoleva, N. E., ... & Gogolev, Y. V. (2021). Differential modulation of the lipoxygenase cascade during typical and latent Pectobacterium atrosepticum infections. Annals of Botany.
• Kravchenko U., Gogoleva N., Kalubaka N., Kruk A., Diuba Y., Gogolev Y., Nikolaichik E. The PhoPQ Two-Component System Q12Is the Major Regulator of Cell Surface Properties, Stress Responses and Plant-Derived Substrate Utilisation During Development of Pectobacterium versatile-Host Plant Pathosystems // Front. Microbiol. – 2021. – V. 11. – P 3596. doi: 10.3389/fmicb.2020.621391

• Zhuravleva D.E. Complete Genome Sequence of Lactobacillus hilgardii LMG 7934, Carrying the Gene Encoding for the Novel PII-Like Protein PotN/ D.E. Zhuravleva, Z.I. Iskhakova, G.D. Ozhegov, N.E. Gogoleva, D.R. Khusnutdinova, E.I. Shagimardanova, K. Forchhammer, A.R. Kayumov // Current Microbiology. - 2020. - Vol.77, Is.11. – P.3538-3545.

• Gogoleva N.E., Nikolaichik Y.A., Ismailov T.T., Khlopko Y.A., Dmitrieva S.A., Konnova T.A., Ermekkaliev T.S., Safronova V.I., Belimov A.A., Gogolev Y.V. Complete Genome Sequence of Abscisic Acid-Metabolizing Rhizobacterium Rhodococcus sp. Strain P1Y // Microbiology Resource Announcements. – 2019. – 8(15). – e01591-18
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• Gogoleva N.E., Nikolaichik Y.A., Ismailov T.T., Gorshkov V.Y., Safronova V.I., Belimov A.A., Gogolev Y.V. Complete genome sequence of the abscisic acid-utilizing strain Novosphingobium sp. P6W // 3 Biotech. – 2019. – 9(94)
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• Горшков В.Ю., Петрова О.Е., Парфирова О.И., Исламов Б.Р., Церс И.Д., Гоголева Н.Е., Агеева М.В., Даминова А.Г., Губаев Р.Ф., Микшина П.В., Воробьев В.Н., Гоголев, Ю.В. Гнить или не гнить: война и мир между растениями и фитопатогенными пектобактериями // Стратегия взаимодействия микроорганизмов и растений с окружающей средой: Материалы конференции. Саратов: ООО «Издательский Центр Наука«. ISBN 978-5-9999-3239-6 – Саратов, 14-18 октября 2019. – С.53.
• Olga Petrova, Vladimir Gorshkov, Amina Daminova, Iuliia Sergeeva, Natalia Gogoleva, Yuri Gogolev (2019) A multiplicity of adaptive strategies in phytopathogenic bacterium Pectobacterium atrosepticum // 8th Congress of European Microbiologists (FEMS2019). – Glasgow, Scotland. July 7-11, 2019. – P.997.
• на английском

• Ziganshina E.E., Mohammed W.S., Doijad S.P., Shagimardanova E.I., Gogoleva N.E., Ziganshin A.M. Draft genome sequence of Brevibacterium epidermidis EZ-K02 isolated from nitrocellulose-contaminated wastewater environments // Data in Brief. - 2018. - Vol. 17. - P. 119-123.
• Gorshkov V., Gubaev R., Petrova O., Daminova A., Gogoleva N., Ageeva M., Parfirova O., Prokchorchik M., Nikolaichik E., Gogolev Y. Transcriptome profiling helps to identify potential and true molecular switches of stealth to brute force behavior in Pectobacterium atrosepticum during systemic colonization of tobacco plants // Eur J Plant Pathol. – 2018. – doi: 10.1007/s10658-018-1496-6
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• Mohammed W.S., Ziganshina E.E., Shagimardanova E.I., Gogoleva N.E., Ziganshin A.M. Comparison of intestinal bacterial and fungal communities across various xylophagous beetle larvae (Coleoptera: Cerambycidae) // Scientific Reports. - 2018. - Vol. 8. - Art. №10073.
• Ziganshina E.E., Mohammed W.S., Shagimardanova E.I., Vankov P.Y., Gogoleva N.E., Ziganshin A.M. Fungal, bacterial, and archaeal diversity in the digestive tract of several beetle larvae (Coleoptera) // Biomed Research International. - 2018. - Vol. 2018. - Art. № 6765438.

• Kovtunov E. Phenol oxidases from Pectobacterium atrosepticum: identification and cloning of genes, characteristics of the enzymes and assessment of the transcript levels / E. Kovtunov, N. Tarasova, N. Gogoleva, V. Gorshkov, О. Petrova, E. Osi-pova, Y. Gogolev // 42 FEBS Congress: Abstract book. – Jerusalem, Israel, 10-14 September, 2017. – P. 354.
• Mohammed W.S., Ziganshina E.E., Shagimardanova E.I., Gogoleva N.E., Ziganshin A.M. Draft genome sequence of Paenibacillus sp. EZ-K15 isolated from wastewater systems // BMC Research Notes. - 2017. - Vol. 10. - Art. № 734.
• Gorshkov V. Polyphenol oxidase from Pectobacterium atrosepticum: identification and cloning of gene and characteristics of the enzyme / V. Gorshkov, N. Tarasova, N. Gogoleva, E. Osipova, O. Pe-trova, E. Kovtunov, Y. Gogolev // J Basic Microbiol. – 2017. – Р. 1–12.