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• Zhuravleva D.E. Complete Genome Sequence of Lactobacillus hilgardii LMG 7934, Carrying the Gene Encoding for the Novel PII-Like Protein PotN/ D.E. Zhuravleva, Z.I. Iskhakova, G.D. Ozhegov, N.E. Gogoleva, D.R. Khusnutdinova, E.I. Shagimardanova, K. Forchhammer, A.R. Kayumov // Current Microbiology. - 2020. - Vol.77, Is.11. – P.3538-3545.
• Ozhegov G. D. Whole genome sequence data of Lactobacillus fermentum HFD1, the producer of antibacterial peptides / G. D. Ozhegov, A. S. Pavlova, D. E. Zhuravleva, N. E. Gogoleva, E. I. Shagimardanova, M. I. Markelova, D. R. Yarullina, A. R. Kayumov // Data in brief. – 2020. – V. 32. – P. 106105.
• Ananeva, A. High-resolution allele frequencies for HLA-A, HLA-B, HLA-C, HLA-DQB1, HLA-DRB1 typing of bone marrow donors recruited by the national bone marrow donors registry named after Vasya Perevoshchikov, Russia / Y. Leksina, A. Andryshkina, R. Gaifullina, E. Shagimardanova // HLA. -V.95. -I.4. -2020. -P.102-103
• Ryabova A, Cornette R, Cherkasov A, Combined metabolome and transcriptome analysis reveals key components of complete desiccation tolerance in an anhydrobiotic insect//Proceedings of the National Academy of Sciences of the United States of America. - 2020. - Vol.117, Is.32. - P.19209-19220.
• Deviatiiarov R, Ayupov R, Laikov A, Diversity and regulation of S-adenosylmethionine dependent methyltransferases in the anhydrobiotic midge//Insects. - 2020. - Vol.11, Is.9. - P.1-11.
• Anastasiia Ananeva, Iuliia Sergeeva, Raushania Gaifullina, Elena Shagimardanova. The novel allele HLA‐A*11:362 identified in two unrelated bone marrow donors from Russia. HLA. 2021 Mar;97(3):218-219. doi: 10.1111/tan.14082. Epub 2020 Oct 8.
• Anastasiia Ananeva, Iuliia Sergeeva, Raushania Gaifullina, Elena Shagimardanova. A novel HLA‐B allele, HLA‐B*44:493, detected in a potential hematopoietic stem cell donor. HLA. 2020 Dec;96(6):730-732. doi: 10.1111/tan.14084. Epub 2020 Oct 8.
• Khilyas I.V, Sorokina A.V, Markelova M.I, Genomic and phenotypic analysis of siderophore-producing Rhodococcus qingshengii strain S10 isolated from an arid weathered serpentine rock environment//Archives of Microbiology. - 2020. - Vol., Is.. - .
• Tokumoto S, Miyata Y, Usui K, Development of a tet-on inducible expression system for the anhydrobiotic cell line, PV11//Insects. - 2020. - Vol.11, Is.11. - P.1-14.
• Khilyas, I. V., Genomic and phenotypic analysis of siderophore-producing Rhodococcus qingshengii strain S10 isolated from an arid weathered serpentine rock environment / Khilyas, I. V., Sorokina, A. V., Markelova, M. I., Belenikin, M., Shafigullina, L., Tukhbatova, R. I., Shagimardanova, E.I., Blom, J., Sharipova, M. R., Cohen, M. F. // Arch Microbiol. - 2020. - https://doi.org/10.1007/s00203-020-02057-w
  Khilyas_et_al.__2020.pdf
• Zlotina A, Melnik O, Fomicheva Y, A 300-kb microduplication of 7q36.3 in a patient with triphalangeal thumb-polysyndactyly syndrome combined with congenital heart disease and optic disc coloboma: a case report//BMC Medical Genomics. - 2020. - Vol.13, Is.1. - Art. № 175.
• Ryabova A, Kozlova O, Kadirov A, Detr db: A database of ionizing radiation resistance determinants//Genes. - 2020. - Vol.11, Is.12. - P.1-9.
• Lisitsa T., Danishevich A., Litvinova M., Investigating of genetic variants, associated with breast cancer in Russian women//EUROPEAN JOURNAL OF HUMAN GENETICS. - 2020. - Vol.28, Is.SUPPL 1. - P.496-497.
• Anastasiia Ananeva, Iuliia Sergeeva, Raushania Gaifullina, Elena Shagimardanova.Characterization of the new HLA-B*35:482, detected in a potential hematopoietic stem cell donor. HLA. 2021 Mar;97(3):233-235. doi: 10.1111/tan.14150. Epub 2020 Dec 8.
• Anastasiia Ananeva, Yana Leksina, Iuliia Sergeeva, Raushania Gaifullina, Elena Shagimardanova. Characterization of three new HLA-A*11 alleles in Russian individuals by next-generation sequencing. HLA. 2021 Apr;97(4):351-353. doi: 10.1111/tan.14153. Epub 2020 Dec 2.
• Voronina, T.A., Nesmelov, A.A. (equal contribution), Kondratyeva, S.A., et al. New group of transmembrane proteins associated with desiccation tolerance in the anhydrobiotic midge Polypedilum vanderplanki. Scientific Reports, 2020, V.10 (1).
• Makhnovskii P.A, Zgoda V.G, Bokov R.O, Regulation of Proteins in Human Skeletal Muscle: The Role of Transcription//Scientific Reports. - 2020. - Vol.10, Is.1. - Art. № 3514.

• Kuzmich Elena V., Makarenko Olga A., Vavilov Michail N., MOST COMMON HLA ALLELES AND FIVE-LOCUS HAPLOTYPES IN NATIONAL BONE MARROW DONORS REGISTRY NAMED AFTER VASYA PEREVOSHCHIKOV, RUSSIA//HLA. - 2019. - Vol.93, Is.5. - P.356-357.
• Shagimardanova Elena I., Leksina Yana A., Gabidullina Regina I., NOVEL HLA ALLELES BASED ON POLYMORPHISM OUTSIDE THE KEY EXONS AS A RESULT OF FULL LENGTH NGS: WHAT NOW?//HLA. - 2019. - Vol.93, Is.5. - P.390-390.
• Klyuchnikov Dmitry Y., Vavilov Mikhail N., Trusova Larisa M., THE MOST FREQUENT HLA-A, -B AND-DRB1 ALLELES IN TATARS FROM CHELYABINSK REGION, SAMARA REGION AND TATARSTAN//HLA. - 2019. - Vol.93, Is.5. - P.349-349.
• Miyata Y, Tokumoto S, Sogame Y, Identification of a novel strong promoter from the anhydrobiotic midge, Polypedilum vanderplanki, with conserved function in various insect cell lines//Scientific Reports. - 2019. - Vol.9, Is.1. - Art. № 7004.
• Popov D.V, Makhnovskii P.A, Shagimardanova E.I, Contractile activity-specific transcriptome response to acute endurance exercise and training in human skeletal muscle//American journal of physiology. Endocrinology and metabolism. - 2019. - Vol.316, Is.4. - P.E605-E614.
• Arleevskaya M., Larionova R., Kravtsova O., Shagimardanova E., Validov S., Valeeva A., Valieva D., Boulygina E., Takha E., Shuralev E., Mukminov M., Kazarian G., Renaudineau Y. Infections, microbiota and immune response at early stage of rheumatoid arthritis: results from the Tatarstan cohort // Proceeding of the VII International Meeting: New concepts on the mechanisms of inflammation, autoimmunity and tumorogenesis (6-8 June 2019, Kazan, Russia). – Kazan: MeDDok, 2019. – P. 76.
• Gazizova G., Tyapkina O., Deviatiiarov R., Kozlova O., Shagimardanova E., Gusev O. Promoter-level expression atlas of skeletal muscle in hibernating edible dormouse // Proceedings of 9th Moscow Conference on Computational Molecular Biology (MCCMB'19). 27-30 July 2019, Moscow, Russia. – 2019.
• A. Giliazeva, E. Shagimardanova, L. Shigapova, D. Pudova, M. Sharipova, A. Mardanova. Draft genome sequence and analysis of Klebsiella oxytoca strain NK-1 isolated from ureteral stent. - Data in Brief. ? 2019. - DOI: 10.1016/j.dib.2019.103853.
• Minnullina Leyla, Pudova Daria, Shagimardanova Elena, Shigapova Leyla, Sharipova Margarita, Mardanova Ayslu. Comparative Genome Analysis of Uropathogenic Morganella morganii Strains//FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. - 2019. - Vol.9, Is.. - Art. №167.
• Shagimardanova E., Shigapova L. H., Nikitin A., Evaluation of germ line mutational status among women with triple-negative breast cancer in Russia//ANNALS OF ONCOLOGY. - 2019. - Vol.30, Is.. - .
• Popov, DV, Makhnovskii, PA, Shagimardanova, EL, Gazizova, GR, Lysenko, EA, Gusev, OA, Vinogradova, OL Contractile activity-specific transcriptome response to acute endurance exercise and training in human skeletal muscle // American Journal of Physiology-Endocrinology and Metabolism. – 2019. Vol. 316. №. 4. P. E605-E614. https://doi.org/10.1152/ajpendo.00449.2018
• Gazizova G., Deviatiiarov R., Tyapkina O., Cherkasov A., Nurullin L., Shagimardanova E., Gusev O. Regulation of hibernation: promoter expression landscape in skeletal muscle of edible dormouse // Proceedings of 33rd International Mammalian Genome Conference (IMGC-2019). 25-28 September, 2019. Stras-bourg, France. – 2019. – p. 41
• Data on the genome analysis of the probiotic strain Bacillus subtilis GM5 / G.F. Hadieva, M.T. Lutfullin, D.S. Pudova, Y.A. Akosah, E.I. Shagimardanova, A.M. Mardanova, M.R. Sharipova // Data in Brief. 2019. https://doi.org/10.1016/j.dib.2018.12.081.

• Ziganshina E.E., Mohammed W.S., Doijad S.P., Shagimardanova E.I., Gogoleva N.E., Ziganshin A.M. Draft genome sequence of Brevibacterium epidermidis EZ-K02 isolated from nitrocellulose-contaminated wastewater environments // Data in Brief. - 2018. - Vol. 17. - P. 119-123.
• A. Cherkasov, A. Ryabova, N. Battulin, A. Ananeva, O. Gusev, E. Shagimardanova (2018). Three-dimensional organization of genome of sleeping chironomid Polypedilum vanderplanki. FEBS Open Bio, 8: P.02-018, P.136. doi:10.1002/2211-5463.12453
• Gazizova, G., Deviatiiarov R., Nigmetzyanov, I., Forrest A., Deev R., Hayashizaki Y., Shagimardanova E., Gusev O. Promoter-level atlas of diversity of gene expression in the mammalian skeletal muscles: scope and milestones of the project // Human Genomics 2018, 12 (Suppl 1):9 P.28
  F_HGM.pdf
• Nesmelov Alexander, Shagimardanova Elena, Kikawada Takahiro G.O. Involvement of Heat Shock Proteins in Invertebrate Anhydrobiosis // Heat Shock Proteins and Stress / A.A. Asea, P. Kaur., eds. Singapore: Springer international PU, 2018. С. 232–243.
• Localization of LEA proteins in the cells of anhydrobiotic insect / A. Nesmelov, T. Voronina, S. Kondratyeva, E. Shagimardanova // Abstracts of 43st FEBS Congress «Biochemistry forever« Prague, Czech Republic, 07.07.2018 - 12.07.2018.
• Ziganshina E.E., Mohammed W.S., Shagimardanova E.I., Vankov P.Y., Gogoleva N.E., Ziganshin A.M. Fungal, bacterial, and archaeal diversity in the digestive tract of several beetle larvae (Coleoptera) // Biomed Research International. - 2018. - Vol. 2018. - Art. № 6765438.
• Garanina, E.E. Activation of FGFR-signaling mediates resistance of gastrointestinal stromal tumors (GISTs) to imatinib (IM) / E.E. Garanina, S. Boichuk; P. Dunaev; A. Galembikova;E. Shagimardanova; O. Gusev; S. Khaiboullina // European journal of clinical investigation. - 2018. - Vol.48, supp.1. - P.159
  F_2018_European_Journal_of_Clinical_Investigation__ABSTRACT_.pdf
• Shigapova L. Genetic predisposition to cancer due to germline mutations in DNA reparation-associated genes among Russian woman/ Shigapova L, Gordiev M, Druzkov M, Enikeev R, Nikitin A,Leksina Y, Gusev O, Shagimardanova E.// Human Genome Meeting 2018, Yokohama, Japan, 12-15 March 2018.- Human Genomics-2018.- Vol.-12(Suppl 1)
• Mohammed W.S., Ziganshina E.E., Shagimardanova E.I., Gogoleva N.E., Ziganshin A.M. Comparison of intestinal bacterial and fungal communities across various xylophagous beetle larvae (Coleoptera: Cerambycidae) // Scientific Reports. - 2018. - Vol. 8. - Art. №10073.
• Ziganshina E.E., Mohammed W.S., Shagimardanova E.I., Shigapova L.H., Ziganshin A.M. Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes // BMC Research Notes. - 2018. - Vol. 11. - Art. № 606.
• Nesmelov A., Voronina T., Kondratyeva S., Localization of LEA proteins in the cells of anhydrobiotic insect//FEBS OPEN BIO. - 2018. - Vol.8, Is.. - P.292-292.
• Brovkina OI, Shigapova L, Chudakova DA, Gordiev MG, Enikeev RF, Druzhkov MO, Khodyrev DS, Shagimardanova EI, Nikitin AG and Gusev OA (2018) The Ethnic-Specific Spectrum of Germline Nucleotide Variants in DNA Damage Response and Repair Genes in Hereditary Breast and Ovarian Cancer Patients of Tatar Descent. Front. Oncol. 8:421. doi: 10.3389/fonc.2018.00421
• M. Gordiev, L.H. Shigapova, O. Brovkina, R.F. Enikeev, M. Druzhkov, A. Nikitin,E. Shagimardanova, O. Gusev. Lynch syndrome-associated hereditary mutations cause breast and ovarian cancer: Results from Russian Heredetary Oncogenomics project/Annals of Oncology.- 2018.-V.29. DOI: 10.1093/annonc/mdy270.236
• Ziganshina E.E., Mohammed W.S., Shagimardanova E.I., Shigapova L.H., Ziganshin A.M. Draft genome sequence of Staphylococcus sp. EZ-P03 isolated from a mesophilic anaerobic digester // BMC Research Notes. - 2018. - Vol.11 - Art. № 694.
• A. Ryabova, E. Shagimardanova, A. Cherkasov, S. Kuznetsova, T. Kikawada, O. Gusev (2018). Metabolic profiling of desiccation - rehydration cycle in anhydrobiotic chironomid Polypedilum vanderplanki. FEBS Open Bio, 8: P.24-036, P.471. doi:10.1002/2211-5463.12453
• A. Cherkasov, A. Ryabova, N. Battulin, A. Ananeva, O. Gusev, E. Shagimardanova (2018). Three-dimensional organization of genome of sleeping chironomid Polypedilum vanderplanki. FEBS Open Bio, 8: P.02-018, P.136. doi:10.1002/2211-5463.12453
• О. Гусев, Е. Шагимарданова, Р. Девятияров, Г. Газизова, Й. Хаяшизаки Muscle FANTOM: атлас экспрессии промоторов в скелетных мышцах человека и приматов // В поисках моделей персонализированной медицины. Сборник научных трудов V Международной конференции «ПОСТГЕНОМ'2018», Казань, 29 октября – 2 ноября 2018. - 2018. - С. 15.
• Ziganshina E.E., Mohammed W.S., Shagimardanova E.I., Ziganshin A.M. Draft genome sequence data and analysis of Brachybacterium sp. strain EE-P12 isolated from a laboratory-scale anaerobic reactor // Data in Brief. - 2018. - Vol. 21. - P. 2576-2580.
• Mazin P.V, Shagimardanova E, Kozlova O, Cooption of heat shock regulatory system for anhydrobiosis in the sleeping chironomid Polypedilum vanderplanki//Proceedings of the National Academy of Sciences of the United States of America. - 2018. - Vol.115, Is.10. - P.E2477-E2486.

• Gazizova G., Kozlova O., Tyapkina O., Nurullin L., Shagimardanova E. Semaphorins Are likely to Be Involved in the Control of Hibernation // BioNanoSci. (2017). doi:10.1007/s12668-016-0292-z
• Khaiboullina Svetlana F., Mendelevich Elena G., Shigapova Leyla H., Cerebellar Arophy and changes in Cytokines Associated with the CACNA1A R583Q Mutation in a Russian Familial Hemiplegic Migraine Type 1 Family//FRONTIERS IN CELLULAR NEUROSCIENCE. - 2017. - Vol.11, Is.. - Art. №263.
• CDK12: New breast and ovarian cancer predisposition gene in Tatar population? / Shagimardanova E., O Brovkina, M Gordiev, R Enikeev, L Shigapova, D Khodyrev, O. Gusev, A Kedrova, V Kosiy, A Nikitin.// Oxford Journals:Annals of Oncology. - 2017 - V.28. - doi:10.1093/annonc/mdx362.61
• Mohammed W.S., Ziganshina E.E., Shagimardanova E.I., Gogoleva N.E., Ziganshin A.M. Draft genome sequence of Paenibacillus sp. EZ-K15 isolated from wastewater systems // BMC Research Notes. - 2017. - Vol. 10. - Art. № 734.
• Gusev O., Nesmelov A., Gazizova G., Analysis of LEA proteins evolution in closely related anhydrobiotic species of chironomid midges//FEBS JOURNAL. - 2017. - Vol.284, Is.. - P.322-322.

• New Antioxidant Genes from an Anhydrobiotic Insect: Unique Structural Features in Functional Motifs of Thioredoxins. A.A. Nesmelov, R.M. Devatiyarov, T.A. Voronina, S.A. Kondratyeva, A. V. Cherkasov, R. Cornette, et al., Bionanoscience. (2016) 6: 568. doi:10.1007/s12668-016-0278-x
• Kozlova O., Cherkasov A., Przhiboro A., Shagimardanova E. Complexity of Expression Control of HSP70 Genes in Extremophilic Midges // BioNanoSci. (2016). doi:10.1007/s12668-016-0256-3
• Shagimardanova E., Shigapova L., Gusev O., Nikitin A., Druzhkov N.,Enikeev R., Gordiev M. Germline BRCA screening in breast cancer patients in Tatar women population/Shagimardanova E., Shigapova L., Gusev O., Nikitin A., Druzhkov N.,Enikeev R., Gordiev M. //ANNALS OF ONCOLOGY. - 2016. - Vol.27(suppl_6)
• A.A. Nesmelov, E.I. Shagimardanova, M.D. Logacheva, R. Cornette, T. Kikawada, O.A. Gusev Regulation of thioredoxin genes expression in desiccation-tolerant insect Polypedilum vanderplanki / Abstracts of 10th anniversary International Multiconference Bioinformatics of Genome Regulation and Structure and Systems Biology. - Novosibirsk, Russia, 29.08-02.09.2016 p. 202.
• Ryabova, A., Mukae, K., Cherkasov, A. et al. Genetic background of enhanced radioresistance in an anhydrobiotic insect: transcriptional response to ionizing radiations and desiccation. Extremophiles (2016). doi:10.1007/s00792-016-0888-9

• Gusev O.A. Single cell molecular toolkit for inducible resistance to complete desiccation / O.Gusev, A.Nesmelov, R.Deviatiarov, E.Shagimardanova, J.Okada, R.Cornette, M. Logacheva, A. Penin, A. Forrest, T.Kikawada // Proceedings of the International Moscow Conference on Computational Molecular Biology (16-19 July 2015, Moscow, Russia). - Moscow, 2015. - p.146-147
  61.pdf
• A.Nesmelov, E.Shagimardanova, M.Logacheva, R.Cornette, T. Kikawada, O. Gusev Antioxidant system of desiccation-tolerant insect Polypedilum vanderplanki / Proceedings of the International Moscow Conference on Computational Molecular Biology. - Moskow, Russia, 16.07-19.07.2015 p. 174-176
  174.pdf

• Shagimardanova EI, Toymentseva AA, Balaban NP, Mardanova AM, Danilova YV, Gusev OA, Kostryukova E, Karpova I, Manolov A, Alexeev D, Sharipova MR.Draft Genome Sequence of Bacillus pumilus 7P, Isolated from the Soil of the Tatarstan Republic, Russia. Genome Announc. 2014 Jun 12;2(3).
• Danilova YV, Shagimardanova EI, Margulis AB, Toymentseva AA, Balaban NP, Rudakova NL, Rizvanov AA, Sharipova MR, Palotás A. Bacterial enzymes effectively digest Alzheimer's β-amyloid peptide.Brain Res Bull. 2014, 108, P.113-117.
• Danilova Y.V. Bacterial enzymes effectively digest Alzheimer's β-amyloid peptide / Y.V. Danilova, E.I. Shagimardanova, A.B. Margulis, A.A. Toymentseva, N.P. Balaban, N.L. Rudakova, A.A. Rizvanov, M.R. Sharipova, A. Palotás // Brain Res Bull. - 2014. V.108, No.1. - P.113-117.
• Bacterial enzymes effectively digest Alzheimer's В-amyloid peptide
  2014_Bacterial_enzymes_effectively_digest_Alzheimer_s_B_amyloid_peptide.pdf
• Vladimir Evtugyn Morphological changes associated with induced complete desiccation resistance in the cell line derived from an anhydrobiotic insect Vladimir Evtugyn, Jun Okada, Elena Shagimardanova, Takashi Okuda, Takahiro Kikawada, Oleg Gusev 23-27 March, Pornichet France
• Gusev O., Suetsugu Y., Cornette R.,Kawashima T., Logacheva M., Kondrashov A.,Penin A., Hatanaka R., Kikuta Sh., Shimura S., Katayose Y.,Matsumoto T., Shagimardanova E., Alexeev D.,Govorun V., Wisecaver J., Mikheyev A., Koyanagi R., Nishiyama T., Shigenobu Sh., Shibata T., Galygina V., Hasebe M., Okuda T., Satoh N. and Kikawada T. Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge. Nature Communications, 5, 4784; doi:10.1038/ncomms5784
• Mardanova AM, Toymentseva AA, Gilyazeva AG, Kazakov SV, Shagimardanova EI, Khaitlina SY, Sharipova MR.Draft Genome Sequence of Serratia grimesii Strain A2.Genome Announc. 2014 Sep 18;2(5).

• Shagimardanova E.I., Sharipova M.R., T. Kikawada, Gusev O.A. Sleeping hyronomid Polypedilum vanderplanki – a new tool for studying host-microbial interactions. Book of abstracts of the UK-Russia Frontiers of Science Symposium. Kazan, 12-14 March, 2013.
• Toymentseva A.A, Akhmetova A.I, Karimova M.R, Bacillus pumilus strains with inactivated genes of extracellular serine proteinases//Microbiology (Russian Federation). - 2013. - Vol.82, Is.1. - P.59-67.
• А.А.Тойменцева,А.И.Ахметова,М.Р.Каримова,Ч.Нямсурэн,Ю.О.Пономарева,Е.И.Шагимарданова,А.А.Ризванов,М.Р.Шарипова / ШТАММЫ BACILLUS PUMILUS С ИНАКТИВИРОВАННЫМИ ГЕНАМИ ВНЕКЛЕТОЧНЫХ СЕРИНОВЫХ ПРОТЕИНАЗ // МИКРОБИОЛОГИЯ, 2013, том 82, № 1, с. 1–10
• Toymentseva А.А. Bacillus pumilus Strains with Inactivated Genes of Extracellular Serine Proteinases / А.А. Toymentseva, A.I. Akhmetova, M.R. Karimova, C. Nyamsuren, Yu.O. Ponomareva, E.I. Shagimardanova, A.A. Rizvanov, M.R. Sharipova // Microbiology. – 2013. – Vol.82. No.1. – P.59-68.

• Shagimardanova E.I, Sharipova M.R, Rizvanov A.A, Life without water: Cryptobiosis of invertebrates as a model for next generation techmology of biomaterials preservation//Cellular Transplantation and Tissue Engineering. - 2012. - Vol.7, Is.3. - P.185-189.