Positions*
Performance
Performance
2024
2023
-
Markelova M, Senina A, Khusnutdinova D, Association between Taxonomic Composition of Gut Microbiota and Host Single Nucleotide Polymorphisms in Crohn?s Disease Patients from Russia//International Journal of Molecular Sciences. - 2023. - Vol.24, Is.9. - Art. №7998.
-
Siniagina, M.N. Hydrogen sulfide-producing Escherichia coli strains in a patient with Crohn's colitis: a clinical case / M.N. Siniagina, A.V. Laikov, M.I. Markelova, E.A. Boulygina, N.A. Danilova, E.A. Sultanbekova, S.R. Abdulkhakov, T.V. Grigoryeva // FEBS Open Bio. - 2023. - V. 13 (Suppl. S2). - P. 159.
abstract_FEBS2023.pdf -
Karaseva O, Ozhegov G, Khusnutdinova D, Whole Genome Sequencing of the Novel Probiotic Strain Lactiplantibacillus plantarum FCa3L//Microorganisms. - 2023. - Vol.11, Is.5. - Art. №1234.
2022
-
Romanova V, Markelova M, Boulygina E, Significance of both alkB and P450 alkane-degrading systems in Tsukamurella tyrosinosolvens: proteomic evidence // Applied Microbiology and Biotechnology. - 2022. - 106 (8). - pp. 3153-3171.
- Харитонова М.А., Фролова Л.А., Нигаматзянова Г.Р., Нигматуллин Н.М., Синягина М.Н., Нургалиев Д.К. Метаногены и метанотрофы в структуре сообществ микроорганизмов донных отложений озера Кандрыкуль (Южный Урал) // GREG 2022: Международная научно-исследовательская конференция Эмиссия парниковых газов сегодня и в геологическом прошлом: источники, влияние на климат и окружающую среду. – 2022. – Стр. 53.
- 2. Yakubova A. Genomic Screening of Chronic Migraine Patients Identified Genes Linked to Drug and Endogenous Substances Metabolism / A. Yakubova, E. Shagimardanova, T. Grigoryeva, E. Boulygina, L. Shigapova, M. Siniagina, N. Blatt, R. Giniatullin, A. Rizvanov // BioNanoScience. – 2022. – Vol.12 (1). – P. 154–159.
-
Siniagina M.N, Laikov A.V, Markelova M.I, Competitive ability of Escherichia coli strains in the intestinal microbiota of patients with Crohn's disease and healthy volunteers: physiological, biochemical and genetic characteristics//Zhurnal Mikrobiologii Epidemiologii i Immunobiologii. - 2022. - Vol.99, Is.6. - P.669-681.
- С. 2022623651, Российская Федерация. База данных факторов вирулентности комменсальных Escherichia coli / Синягина М.Н., Маркелова М.И., Лайков А.В., Булыгина Е.А., Григорьева Т.В.; № 2022623511; опубл. 23.12.2022.
- Харитонова М.А., Нургалиев Д.К., Нигаматзянова Г.Р., Нигматуллин Н.М., Синягина М.Н., Фролова Л.А. Метанокисляющие бактерии в структуре бактериальных сообществ донных отложений озера Кандрыкуль // Динамика экосистем в голоцене. – 2022. – С. 183-187.
2021
-
Lo Sasso G, Khachatryan L, Kondylis A, Inflammatory Bowel Disease-Associated Changes in the Gut: Focus on Kazan Patients//Inflammatory bowel diseases. - 2021. - Vol.27, Is.3. - P.418-433.
-
Gaponov A.M, Volkova N.I, Ganenko L.A, Characteristics of the colonic microbiome in patients with different obesity phenotypes (The original article)//Zhurnal Mikrobiologii Epidemiologii i Immunobiologii. - 2021. - Vol.98, Is.2. - P.144-155.
-
Markelova M. TRANSCRIPTOMIC INSIGHT INTO IN VITRO INTERACTION OF ESCHERICHIA COLI WTH IMMUNOGLOBULIN A AS A MODEL OF THE INFLAMMATORY BOWEL DISEASE PATHOGENESIS / Markelova M., Siniagina M., Baichurina I., Laikov A., Boulygina E., Shah Mahmud R., Semin I., Kruglov A., Matuyshkina D., Musarova V., Grigoryeva T. // United European Gastroenterology Journal - October 2020. - Vol.8 (8) - P. 317.
F_UEG2020.pdf - Khusnutdinova D., Markelova M., Siniagina M., Overabundance of Lactobacillus species in gut microbiota of IBD patients//JOURNAL OF CROHNS & COLITIS. - 2021. - Vol.15, Is.. - P.S160-S161.
-
Siniagina, Maria N., et al. Diversity and Adaptations of Escherichia coli Strains: Exploring the Intestinal Community in Crohn's Disease Patients and Healthy Individuals // Microorganisms. - 2021. - V.9. - N.6. - P.1299.
- Siniagina M., Markelova M., Boulygina E., Antibiotic resistome profiles of fecal Escherichia coli isolates in association with Crohn's disease//JOURNAL OF CROHNS & COLITIS. - 2021. - Vol.15, Is.. - P.S601-S602.
-
Siniagina M.N, Markelova M.I, Boulygina E.A, Diversity and adaptations of escherichia coli strains: Exploring the intestinal community in crohn?s disease patients and healthy individuals//Microorganisms. - 2021. - Vol.9, Is.6. - Art. № 1299.
2020
-
Siniagina M, Markelova M, Laikov A, Cultivated Escherichia coli diversity in intestinal microbiota of Crohn's disease patients and healthy individuals: Whole genome data//Data in Brief. - 2020. - Vol.28, Is.. - Art. № 104948.
-
Siniagina M. Cultivated Escherichia coli diversity in intestinal microbiota of Crohn's disease patients and healthy individuals: Whole genome data / M. Siniagina, M. Markelova, A. Laikov, E. Boulygina, D. Khusnutdinova, A. Kharchenko, A. Misbakhova, T. Grigoryeva // Data in brief. - 2020. - V. 28. - 104948
- BILE ACIDS METABOLIZING BACTERIA ABUNDANCE IN THE GUT MICROBIOTA ON THE BACKGROUND OF H.PYLORI ERADICATION THERAPY // Safina D.D., Markelova M., Abdulkhakov S.R., Grigoryeva T., Boulygina E., Khusnutdinova D., Malanin S., Vasilyev I., Siniagina M., Abdulkhakov R. Abstracts of the UEGW 2020 // United European Gastroenterology Journal 2020. – Volume 8 (8). – P. 0652.
- DIARRHEA DURING H.PYLORI ERADICATION THERAPY AND HUMAN GUT MICROBIOTA COMPOSITION AND FUNCTIONAL POTENTIAL ALTERATIONS // Safina D.D., Markelova M., Abdulkhakov S.R., Grigoryeva T., Boulygina E., Khusnutdinova D., Malanin S., Vasilyev I., Siniagina M., Abdulkhakov R. Abstracts of the UEGW 2020 // United European Gastroenterology Journal 2020. – Volume 8 (8). – P. 0650.
- Khusnutdinova D. SHIFTS IN RESISTANCE OF LACTOBACILLUS IN HUMAN GUT MICROBIOTA AFTER HELICOBACTER PYLORI ERADICATION THERAPY / Khusnutdinova D., Markelova M., Siniagina M., Boulygina E., Malanin S., Grigoryeva T.V., Abdulkhakov S., Abdulkhakov R.A., Chernov V., Chernova O. // United European Gastroenterology Journal - October 2020. - Vol.8 (8) - P. 502.
2019
- Romanova Valeriya A., Boulygina Eugenia A., Siniagina Maria N., Draft Genome Sequence of a Medium- and Long-Chain n-Alkane-Degrading Bacterium, Tsukamurella tyrosinosolvens Strain PS2, with Two Genetic Systems for Alkane Degradation//MICROBIOLOGY RESOURCE ANNOUNCEMENTS. - 2019. - Vol.8, Is.17. - Art. №e00218-19.
-
Khusnutdinova D. The development of resistance to clarithromycin and amoxicillin in Lactobacillus plantarum is accompanied by mutations not only in target genes / Khusnutdinova D., Markelova M., Boulygina E., Kupriyanova E., Siniagina M., Baranova N., Grigoryeva T., Chernov V., Chernova O. // United European Gastroenterology Journal - October 2019. - Vol.7 (8S) - P. 926.
- Siniagina M. No difference in the distribution of pathogenic factors found in Escherichia coli isolates from patients with Crohn's disease and healthy individuals / Siniagina M., Markelova M., Laikov A., Boulygina E., Khusnutdinova D., Kharchenko A., Fedorova M., Romanova V., Grigoryeva T. // United European Gastroenterology Journal - October 2019. - Vol.7 (8S) - P. 870.
-
Siniagina M. Cultivated Escherichia coli diversity in intestinal microbiota of Crohn's disease patients and healthy individuals: whole genome data / Siniagina M., Markelova M., Laikov A., Boulygina E., Khusnutdinova D., Kharchenko A., Misbakhova A., Grigoryeva T. //Data in Brief. – 2019. – V. 28. - P. 104948.
F_DatainBrief2019.pdf -
Khilyas I.V. Microbial diversity and mineral composition of weathered serpentine rock of the Khalilovsky massif / Khilyas I.V., Sorokina A.V., Elistratova A.A., Siniagina M.N., Markelova M.I., Sharipova M.R., Shcherbakova T.A., Megan E. D'Errico, Michael F. Cohen //PLOS One, 2019.-V. 14.-N12.-DOI 10.1371/journal.pone.0225929.
F_Khilyas_et_al.__2019_Plos.pdf
2018
-
Baranova N.B, Malygina T.Y, Medvedeva E.S, Genome sequences of Acholeplasma laidlawii strains with increased resistance to tetracycline and melittin//Genome Announcements. - 2018. - Vol.6, Is.2. - Art. № e01446-17.
- Safina D., Markelova M., Abdulkhakov S., Taxonomic diversity changes in human gut microbiota due to Helicobacter pylori eradication therapy//HELICOBACTER. - 2018. - Vol.23, Is.. - .
- Medvedeva E.S. Molecular bases of Acholeplasma laidlawii adaptation to environmental conditions / E.S. Medvedeva, N.B. Baranova, A.A. Mouzykantov, M.N. Siniagina, E.A. Boulygina, M.N. Davydova, O.A. Chernova, V.M. Chernov // The 14th Biennial Congress of the Anaerobe Society of the Americas. Anaerobe 2018. Abstract book. –July 9-12, 2018. – Las Vegas, Nevada, USA. – P. 159.
- Baranova N. B. et al. Genome Sequences of Acholeplasma laidlawii Strains with Increased Resistance to Tetracycline and Melittin / N. B. Baranova, T. Malygina, E. S. Medvedeva, E. A. Boulygina, M. N. Siniagina, M. A. Dramchini, R. A. Prottoy, A. A. Mouzykantov, M. N. Davydova, O. A. Chernova, V. M. Chernov //Genome announcements. – 2018. – V. 6. – N. 2. – P. e01446-17.
- Siniagina M.N. Crohn's disease-associated Escherichia coli serotyping through the whole-genome sequencing of cultivated intestinal community / M.N. Siniagina, M.I. Markelova, A.V. Laikov, E.A. Boulygina, T.V. Grigoryeva // 5th European Congress of Immunology ECI2018: abstract book. - P. 432
-
Tyakht A.V, Manolov A.I, Kanygina A.V, Genetic diversity of Escherichia coli in gut microbiota of patients with Crohn's disease discovered using metagenomic and genomic analyses//BMC Genomics. - 2018. - Vol.19, Is.1. - Art. № 968.
2017
-
Mouzykantov A. A. Plasticity of Mycoplasmas: Changes in the Genomic Profile, as well as in the Cellular and Vesicular Proteomes of the Acholeplasma laidlawii in Adapting the Bacterium to Different Environmental Conditions / A. A. Mouzykantov, E. S. Medvedeva, T. Y. Malygina, N. B. Baranova, M. N. Davydova, M. N. Siniagina, E. A. Boulygina, R. Shah Mahmud, R. A. Prottoy, M. V. Trushin, O. A. Chernova, V. M. Chernov // BioNanoScience. - 2017. - Vol. 7,. Issue. 2, - P. 323–325. DOI: 10.1007/s12668-016-0362-2
-
Martykanova D. S. et al. Characterization of Dysbiotic Changes of Skin Microbiota in Contact Sports Athletes / Dilyara S. Martykanova, Nailja Ch. Davletova, Ilya A. Zemlenuhin, Salavat M. Mugallimov, Azat M. Ahatov, Nazira S. Karamova, Sergey Yu. Malanin, Alexander V. Laikov, Maria I. Markelova, Maria N. Siniagina, Eugenia A. Boulygina, Tatyana V. Grigoryeva // BioNanoScience – 2016. - Vol.7,Is.1. - P. 1-3
Characterization_of_Dysbiotic_Changes_of_Skin_Microbiota_in_Contact_Sport_Athletes.pdf -
Mouzykantov A.A, Medvedeva E.S, Malygina T.Y, Plasticity of Mycoplasmas: Changes in the Genomic Profile, as well as in the Cellular and Vesicular Proteomes of the Acholeplasma laidlawii in Adapting the Bacterium to Different Environmental Conditions//BioNanoScience. - 2017. - Vol.7, Is.2. - P.323-325.
-
Martykanova D.S, Davletova N.C, Zemlenuhin I.A, Characterization of Dysbiotic Changes of Skin Microbiota in Contact Sports Athletes//BioNanoScience. - 2017. - Vol.7, Is.1. - pp 1-3.
Martykanova.pdf - Medvedeva E.S., Malygina T.Y., Baranova N.B., Mouzykantov А.А., Davydova M.N. , Siniagina M.N., Boulygina E.A., Chernova O.A., Chernov V.M. Molecular bases of antimicrobial resistance of Acholeplasma laidlawii. IC2AR 2017. Proceedings Book. 2nd International Caparica Conference in Antibiotic Resistance. Caparica, Portugal. – 2017. – P. 215.
-
Siniagina M. Genomic profile of Bacillus pumilus 3–19 strain extracellular membrane vesicles / Siniagina M., Markelova M., Evtugyn V., Chernov V. // FEBS J. - 2017. - V. 284. - P. 380. DOI: 10.1111/febs.14174
- Markelova M., Siniagina M., Boulygina E., Gastrointestinal microbiota of the Japanese quail: sex-based differences//FEBS JOURNAL. - 2017. - Vol.284, Is.. - P.380-380.
- Siniagina M., Markelova M., Evtugyn V., Genomic profile of Bacillus pumilus 3-19 strain extracellular membrane vesicles//FEBS JOURNAL. - 2017. - Vol.284, Is.. - P.380-380.
-
Medvedeva E.S, Siniagina M.N, Malanin S.Y, Genome sequences of Acholeplasma laidlawii strains differing in sensitivity to ciprofloxacin//Genome Announcements. - 2017. - Vol.5, Is.44. - Art. № e01189-17.
-
Boulygina E.A, Markelova M.I, Khusnutdinova D.R, Shotgun metagenomic data on the human stool samples to characterize shifts of the gut microbial profile after the Helicobacter pylori eradication therapy//Data in Brief. - 2017. - Vol.14, Is.. - P.458-461.
- Medvedeva E.S. Genome Sequences of Acholeplasma laidlawii Strains Differing in Sensitivity to Ciprofloxacin / Medvedeva E.S., Siniagina M.N., Malanin S.Y., Boulygina E.A., Malygina T.Y., Baranova N.B., Mouzykantov A.A., Davydova M.N., Chernova O.A., Chernov V.M. // Genome Announc. 2017 5(44). pii: e01189-17. doi: 10.1128/genomeA.01189-17.
- S. Malanin. Effects of Helicobacter pylori eradication therapy on gut resistome // S. Malanin, D. Safina, S. Abdulkhakov, D. Khusnutdinova, I. Vasilyev, T. Grigoryeva, M. Siniagina, M. Markelova, E. Boulygina, R. Abdulkhakov, V. Chernov // Helicobacter, Special Issue: XXXth International Workshop on Helicobacter & Microbiota in Inflammation & Cancer, 7-9 September 2017, Bordeaux.- Vol. 22, Is. S1. - P. 128
2016
- Медведева Е. С. Геномный и протеомный профили штаммов Acholeplasma laidlawii, различающихся по чувствительности к ципрофлоксацину / Е.С. Медведева, М.Н. Давыдова, А.А. Музыкантов, Н.Б. Баранова, Т.Ю. Григорьева, М.Н. Синягина, Е.А. Булыгина, О.А. Чернова, В.М. Чернов // Докл. АН. - 2016. - Т. 466, № 2. - С. 228-232.
-
Nguyen N.T, Vafin R.R, Rzhanova I.V, Molecular genetic analysis of microorganisms with intraepithelial invasion isolated from patients with colorectal cancer//Molecular Genetics, Microbiology and Virology. - 2016. - Vol.31, Is.1. - P.15-20.
-
Eugenia A. Boulygina. Lessons from the whole-exome sequencing effort in populations of Russia and Tajikistan / Eugenia A. Boulygina, Elena Lukianova, Tatyana V. Grigoryeva, Maria N. Siniagina, Sergey Yu. Malanin, Elena V. Balanovska, Oleg P. Balanovsky, Vladislav M. Chernov // BioNanoScience. - 2016. - Vol.6,Is.4. - P. 540-542
actual_paper.pdf -
A. Laikov. Proteogenomic profile of the new alkane-oxidizing strain Tsukamurella tyrosinosolvens PS2 in relation to the emulsification activity / A. Laikov, V. Romanova, E. Boulygina, M. Siniagina, J. Romanova, T. Grigorieva // FEBS J. - 2016. - V. 283 (S1) – P. 373.
2016_The_FEBS_Journal_247_247.pdf - Малыгина Т.Ю. Молекулярные основы устойчивости Acholeplasma laidlawii к антимикробным препаратам / Малыгина Т.Ю., Медведева Е.С., Музыкантов А.А., Баранова Н.Б., Давыдова М.Н., Синягина М.Н., Булыгина Е.А., Шах Махмуд Р., Проттой Р.А., Чернова О.А., Чернов В.М. // IV Российский симпозиум с международным участием «Фитоиммунитет и клеточная сигнализация у растений«. Тез. докл. - Казань: Изд-во: «ФизтехПресс« КФТИ КазНЦ РАН. - Казань, Россия. - 2016 г. - С. 95-96
-
Boulygina E.A, Lukianova E, Grigoryeva T.V, Lessons from the Whole Exome Sequencing Effort in Populations of Russia and Tajikistan//BioNanoScience. - 2016. - Vol.6, Is.4. - P.540-542.
BioNanoScience_Boulygina.pdf -
Khusnutdinova D, Grigoryeva T, Abdulkhakov S, Gut Microbiome Shotgun Sequencing in Assessment of Microbial Community Changes Associated with H. pylori Eradication Therapy//BioNanoScience. - 2016. - Vol.6, Is.4. - P.585-587.
- Медведева Е.С. Геномный профиль штаммов Acholeplasma laidlawii, различающихся по чувствительности к антибактериальным препаратам / Медведева Е.С., Давыдова М.Н., Музыкантов А.А., Баранова Н.Б., Григорьева Т.Ю., Синягина М.Н., Булыгина Е.А., Чернова О.А., Чернов В М. // Научные труды V Съезда физиологов СНГ, V Съезда биохимиков России и конференции ADFLIM. – Сочи – Дагомыс, Россия. – ActaNaturae, спецвыпуск. – 2016. – Т. 2. – С.242.
- Medvedeva E.S. Genomic and proteomic profiles of Acholeplasma laidlawii strains differing in sensitivity to ciprofloxacin / E.S. Medvedeva, M.N. Davydova, A.A. Mouzykantov, N.B. Baranova, T.Y. Grygorieva, M.N. Siniagina, E.A. Boulygina, O.A. Chernova, V.M. Chernov // Dokl. Biochem. Biophys. – 2016. – V. 466. – P. 23-27. doi: 10.1134/S1607672916010075.
-
Medvedeva E.S, Davydova M.N, Mouzykantov A.A, Genomic and proteomic profiles of Acholeplasma laidlawii strains differing in sensitivity to ciprofloxacin//Doklady Biochemistry and Biophysics. - 2016. - Vol.466, Is.1. - P.23-27.
2015
-
Belostotskiy D.E., E.E. Ziganshina, M. Siniagina, E.A. Boulygina, V.A. Miluykov, A.M. Ziganshin. Impact of the substrate loading regime and phosphoric acid supplementation on performance of biogas reactors and microbial community dynamics during anaerobic digestion of chicken wastes // Bioresour. Technol. – 2015. – V. 193. – P. 42–52.
Belostotskiy_et_al_2015_BT.pdf -
Сорокина А.В. Продукция сидерофоров металл-толерантными микроорганизмами / А.В. Сорокина, Т.А. Щербакова, М.Н. Синягина, А.А. Тойменцева, М.Р. Шарипова, И.В. Хиляс // Девятый Всероссийский Форум "Наука и инновации в технических университетах" сборник междунар. науч.-практической конф. - Санкт-Петербург, - 2015. - С.147
Piter_2015.pdf -
Vasilyev I. et al. Draft genome sequence of Agreia bicolorata strain AC-1804, a producer of large amounts of carotenoid pigments, isolated from narrow reed grass infected by the phytoparasitic nematode // Genome announcements. – 2015. – Т. 3. – №. 6. – С. e01383-15.
-
Vasilyev I, Siniagina M, Malanin S, Draft genome sequence of Agreia bicolorata strain AC-1804, a producer of large amounts of carotenoid pigments, isolated from narrow reed grass infected by the phytoparasitic nematode//Genome Announcements. - 2015. - Vol.3, Is.6. - Art. № e0138315.
- Григорьева Т.Ю. Молекулярные основы устойчивости микоплазм к фторхинолонам: резистом Acholeplasma laidlawii / Т.Ю. Григорьева, Е.С. Медведева, А.А. Музыкантов, Н.Б. Баранова, М.Н. Синягина, Е.А. Булыгина, М.Н. Давыдова, Г.Ф. Шаймарданова, О.А. Чернова, В.М. Чернов // Биология – наука ХХI века: 19-я Международная Пущинская школа-конференция молодых ученых. Сборник тезисов. – Пущино, Россия. – 2015 г. – С. 172-173.
-
Vasilyev I, Siniagina M, Malanin S, Boulygina E, Grygoryeva T, Yarullina D, et al. Draft Genome Sequence of Agreia bicolorata Strain AC-1804 , a Producer of Large Amounts of Carotenoid Pigments, Isolated from Narrow Reed Grass Infected by the Phytoparasitic Nematode. 2015;3(6):95449.
-
Belostotskiy D.E., Ziganshina E.E., Siniagina M., Boulygina E.A., Miluykov V.A., Ziganshin A.M. Impact of the substrate loading regime and phosphoric acid supplementation on performance of biogas reactors and microbial community dynamics during anaerobic digestion of chicken wastes // Bioresource Technology. - 2015. - Vol. 193. - P. 42-52.
- Medvedeva E.S. Extracellular vesicles and resistance of mycoplasmas to fluoroquinolones: resistome of Acholeplasma laidlawii / E.S. Medvedeva, N.B. Baranova, T.Y. Grigoreva, A.A. Mouzykantov, E.A. Boulyguina, M.N. Siniagina, M.N. Davydova, O.A. Chernova, V.M. Chernov // The 6th Congress of European Microbiologists (FEMS 2015). Program book. – Maastricht, The Netherlands. – 2015. – P. 120.
| Work address: | 9 Parizhskoy Kommuny Str., Kazan, Academic and Research Centre of the Institute of Fundamental Medicine and Biology |
| E-mail: | MaNSinyagina@kpfu.ru |
| Google scholar: | https://scholar.google.ru/citations?user=-XgyELkAAAAJ&hl=ru&oi=ao |
| Scientific and pedagogical experience: |
| General experience: |
| Experience in KFU: |